| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3984 |
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| Symbol | |
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| ID | 5614148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4874992 |
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| End bp | 4875888 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934938 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_001475716 |
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| Protein GI | 157377116 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAG TTCATTGGGG GCTGTTAGTC GCAGCCTATC TGTTTTTAGC TGGTGCGGGA
GCCGGAGCTC TGTTTATCAG TGGTAGTCTC GTGCTGTCAA ATAAAATAGA AGATAAACAT
CACTTAGATA CGGCAAAGAT AAGTACCATT CTGGGGACAC TGTTATTGAT TATTGGTACG
GGAATGATCG TATTCGATCT AACCTCATTC CAATACGGGA TTGCTCATGG GGATATGAGT
AAATTCTTCC GTTTCTACCG CCTGTTTATG ACGTTCGAGC CAAGCTCCAT GATGAGCATA
GGTACCTGGC TGCTGACTTT GGCGATTATC TTTGCATTGC TCTTTTGTCT CTCATTCAGA
GTGAAAGCTA ATCAGCCTGG CTATAGCAGG CCCTTTGCAA TGATTAATGT GATCTTGGCT
ATCTGCGTCG CTTCATATAC CGCGCTACTT ATCGGTGATA TCAGCCATAA CCTGGTTTGG
TCAAACAGTA TTCTGGTCGT GATCTTTTTA CTGTCGGCCC TCTCTTGTGG CGCCGCGGTG
GTGCTAATGG TCAAAACCCG TCTCAAGATA ACAGATACCA ATCACTCCTT TGCTAAATCA
GATTCTGCAC TGTTGGCGCT TGAGTTACTT ACCGTGTGTG TGTTCGCCTA CTCGATTCGC
AACATCAGTA TATTCAATGG AGTTGACAAC CTGCTTTCTA TTTCGAGTGA TGCCGGTGCT
ATTTGGTGGT TAGGTGCCGT TTTAATCGGA TTAATTATGC CGTTATTGCT GAACGTAACG
TCAATCATCG GCAAGACAGT CGCATCTCAT AGCAAAGAGT ATCTGTTAGC TGTGTTGATA
TTAATCGGTG CATTTTGCTT GCGCTATTCG GTTTTACTCG CGGGTCAGTA TTATTAG
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| Protein sequence | MNEVHWGLLV AAYLFLAGAG AGALFISGSL VLSNKIEDKH HLDTAKISTI LGTLLLIIGT
GMIVFDLTSF QYGIAHGDMS KFFRFYRLFM TFEPSSMMSI GTWLLTLAII FALLFCLSFR
VKANQPGYSR PFAMINVILA ICVASYTALL IGDISHNLVW SNSILVVIFL LSALSCGAAV
VLMVKTRLKI TDTNHSFAKS DSALLALELL TVCVFAYSIR NISIFNGVDN LLSISSDAGA
IWWLGAVLIG LIMPLLLNVT SIIGKTVASH SKEYLLAVLI LIGAFCLRYS VLLAGQYY
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