| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3937 |
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| Symbol | |
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| ID | 5613443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4807998 |
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| End bp | 4810154 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934891 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475669 |
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| Protein GI | 157377069 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.631088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.946741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT GGCTTCTTAC TGTCGCTGTC GCCGCCTCTT TCGGCGCTCA AGCCGACGAA
GGTATGTGGC AACCATACCA ACTGCCTGCC TTGGCCGATG AGCTAAAGGC TAAAGGGCTG
GAGATAGATG CAAAATCGAT CTCGAAATTA ACCGAATTCC CCATGAATGC CGTGATCAGC
CTGGGTGGCT GCACCGCTTC ATTTGTCTCG CCTAAAGGTC TTGCCGTGAC TAACCATCAC
TGTGCCTATG GCTCGATTCA GTACAACTCG ACTCCCGAGA AAAACCTGCT TAAAGATGGT
TTCCTGGCTA AGTCTTATGG CGAAGAGCTG CAAGCGACTC CGGGTTCTCG TATCTACGTC
ACCGAAGCCG TCATCAATGT GACTGACAAG GTTAAGAAAG GGTTAGAGAG CAAGGTTGGT
AATGATTTTT ATCAGGGCAT AGAGCATAAG GAAAAGTCCT TAGTTGCCGA GTGTGAAGCC
GAAGATGGTT ATCGTTGTCA GGTCTATAGC TTCCATGGTG GTCTCGAGTA TTACCTGGTT
AAGCAGCTTG AGATCCGAGA TGTGCGTCTG GTGTATAACC CGGCTGCAAG CGTGGGTAAA
TACGGCGGAG ATATCGATAA CTGGATGTGG CCTCGTCACA CCGGTGATTT CTCTTTCTAC
CGTGGTTACG TATCTAAACA GGGTAAGCCT GCCGATTTCA GCAAAGACAA CGTACCCTAC
GAGCCAAAGA GCTTCCTGAA GGTGTCGGCT AAGGGCGTGA GCGATGGCGA TTTTGTCATG
GTTGCCGGTT ATCCAGGCCG TACTAACCGC TACCGCACCG CCAATGAAGT CGAGAATCAG
TTTGAGTGGG CATATCCTGA AGGTAAGATG CTGCGTGAAC GCTTCATCGA GATCATCAAA
GAGACGGCGC CTGAAGGCAG CGACGAGCGC ATCAAGTATG AGAGCCTGAT AGCGGGTCTG
GCTAACTATG CCAAGAACTT CACCTCTATG ATCGAGTTTT ATGGTAAGTC GACGATGCTC
GACGACCGTA AGGGTCGTGA GTCTGAGCTG GCTAACTGGA TCAGCAAAGA CAGTAAGCGT
CAGCAGCAAT ATGGTAAGAC GTTGGCAGAG CTGGATAAGT TGATTGCCGA GGGGCAAGAG
CATCAGGCAC GCGATATCAT ATTAGGTTAT ATCCGTTACA CCACTATGGT GCCTACGGCA
CGTAAGCTAT ATCGCCTTGC CAATGAGAAG CAGCTCGATG ATATGGCGCG TGAACCGGGT
TACCAGGAGC GTGATATGAT CCGCTTCAAG TCTTCGATGG AGCGCATCGA TCGTCGTTAC
GCAGCCAGCG TCGATAAGGC GGTATTGTTC GATCTGTTGA AGCGTTATGC CGTATTGCCA
GGTAGCGAGC GCATCAGTGC CTTAGATAAA GTGTTCGGTA TCGGTAAGAA TCTGGACGAA
AAGAAGCTGT CTAAGACCTT AGATAAGATG TATGCCAAGA CAACGCTTGG TGATATGGAT
ACCCGTCTGG CTTGGCTGGA TAAGTCGGTT GCCGATTTTA AAGCGTCTAA TGATCCTTTC
ATCAAGTTTG CCGTTGCCAT GTATGACACG GACATGAAAG AGGAGAAGAA AGATAAGGAG
CTTGCGGGTA AGCTGATGAA GGTGCGTCCT CAGTATATGG ATGCCATCAT CGCCTATAAC
ACAGAGCTGG GTAAGCCTGT GTACGCCGAT GCTAACTCAA GCCTGCGTGT GTCTGTCGGT
CATGTGAAAG GTTACTCGCC TCAAGACGGT CTTCAGGCTG TGCCATTCAC GCGTTTAGAG
GGGATCCTGG CTAAAGACAC GGGAGCGAAT CCTTTCGATG CGCCATCTAA GCAACTCGAG
CTTATCAAGC AGAAGCAGTA TGGCGATTTC TACGTGAAGT CTCTGGACTC TGTACCGGTT
AACTTCCTCT CGACCTTAGA TACCACAGGT GGTAACTCAG GTTCTCCGAC ACTGAACGGC
CGCGCCGAAT TAGTAGGTCT GCTGTTCGAT GGTGTATATG AGAGCATCAT CGGTGATTGG
GGCTACGATC CTGAGACTAA CCGCTCTATT CAGATCGATA GCCGCTACAT GCTGTGGGTA
ATGAAGTATC TGGACAATGC AGATAACTTG TTAGCCGAGA TGGAGATCGT TCACTAG
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| Protein sequence | MKKWLLTVAV AASFGAQADE GMWQPYQLPA LADELKAKGL EIDAKSISKL TEFPMNAVIS
LGGCTASFVS PKGLAVTNHH CAYGSIQYNS TPEKNLLKDG FLAKSYGEEL QATPGSRIYV
TEAVINVTDK VKKGLESKVG NDFYQGIEHK EKSLVAECEA EDGYRCQVYS FHGGLEYYLV
KQLEIRDVRL VYNPAASVGK YGGDIDNWMW PRHTGDFSFY RGYVSKQGKP ADFSKDNVPY
EPKSFLKVSA KGVSDGDFVM VAGYPGRTNR YRTANEVENQ FEWAYPEGKM LRERFIEIIK
ETAPEGSDER IKYESLIAGL ANYAKNFTSM IEFYGKSTML DDRKGRESEL ANWISKDSKR
QQQYGKTLAE LDKLIAEGQE HQARDIILGY IRYTTMVPTA RKLYRLANEK QLDDMAREPG
YQERDMIRFK SSMERIDRRY AASVDKAVLF DLLKRYAVLP GSERISALDK VFGIGKNLDE
KKLSKTLDKM YAKTTLGDMD TRLAWLDKSV ADFKASNDPF IKFAVAMYDT DMKEEKKDKE
LAGKLMKVRP QYMDAIIAYN TELGKPVYAD ANSSLRVSVG HVKGYSPQDG LQAVPFTRLE
GILAKDTGAN PFDAPSKQLE LIKQKQYGDF YVKSLDSVPV NFLSTLDTTG GNSGSPTLNG
RAELVGLLFD GVYESIIGDW GYDPETNRSI QIDSRYMLWV MKYLDNADNL LAEMEIVH
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