| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3909 |
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| Symbol | |
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| ID | 5610017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4777014 |
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| End bp | 4777973 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934863 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001475641 |
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| Protein GI | 157377041 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATA CAGAGAACGC ATTAGTTATC GACTCGCTGA AGAAAACCTA TAAAGGCGGA
GTCGAGGCGG TAAAAGGAAT TAGCCTCAAG GTCAAGAAGG GCGATTTTTT TGCACTACTC
GGCCCTAATG GTGCGGGCAA GTCGACGACC ATAGGTGTGA TTAGCTCACT GGTGCAGAAG
AGTGAAGGTA AGGTGTCTGT GTTTGAACAC GATATCGACA GTGAGCTGGA GTTGGCTAAG
CTGTGTATCG GTTTGGTCCC ACAGGAGTTT AACTTCAACC AGTTTGAAAC TGTTCTGCAG
ATAGTGGTCA ATCAGGCGGG TTATTACGGT GTGACCAAGG CTGTCGCCCT CAAGCGCGCC
GAGAAGTATT TGACCCAATT GGATCTTTGG GAAAAGCGTA ACAGTCCCTC ACGGACACTG
TCCGGTGGCA TGAAGCGTCG TTTAATGATT GCCAGAGCTC TGATGCATGA GCCAAAGCTG
CTTATTCTCG ATGAACCGAC GGCGGGTGTC GACATTGAGC TCAGACGTTC GATGTGGACC
TTCCTGACGG AGCTTAATGC AGAGGGGGTG ACAATTATTC TGACGACTCA CTATCTGGAA
GAGGCTGAGA TGCTTTGCCG TAATATCGGT ATTATCGATA AAGGTATCCT GGTTGAGTGT
ACCAGTATGA AGTCGTTACT GAGCCGTTTG AATCTTGAAA CCTTTGTGCT CGATCTGAGC
ACGGATCTCA CAGAGACTCC AATGCTTAAG GGGTTCTCCT GCCGTTTAAG CGATGCTCAT
ACTTTAGAGG TCGATGTCGA GAAAGATCAG AGTCTTAATG CGGTATTTAC TCAACTCAGC
GAGCAAGGGC TCGAGGTGCT GTCGATGCGT AACAAGGCCA ACCGTTTAGA GGAGCTGTTT
GTGGAGTTGG TAGAGAAAGG TAAACATCAG CAAACTCAGA ATAAGGACGT GGCATTATGA
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| Protein sequence | MSNTENALVI DSLKKTYKGG VEAVKGISLK VKKGDFFALL GPNGAGKSTT IGVISSLVQK
SEGKVSVFEH DIDSELELAK LCIGLVPQEF NFNQFETVLQ IVVNQAGYYG VTKAVALKRA
EKYLTQLDLW EKRNSPSRTL SGGMKRRLMI ARALMHEPKL LILDEPTAGV DIELRRSMWT
FLTELNAEGV TIILTTHYLE EAEMLCRNIG IIDKGILVEC TSMKSLLSRL NLETFVLDLS
TDLTETPMLK GFSCRLSDAH TLEVDVEKDQ SLNAVFTQLS EQGLEVLSMR NKANRLEELF
VELVEKGKHQ QTQNKDVAL
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