Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3752 |
Symbol | |
ID | 5610170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4572054 |
End bp | 4572347 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640934706 |
Product | TM2 domain-containing protein |
Protein accession | YP_001475484 |
Protein GI | 157376884 |
COG category | [S] Function unknown |
COG ID | [COG2314] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTATCT GCCCACAATG TCATACTGCG CAAGGGTTAG AGGCTTTAGC GGGAGTCGAC CCGAACATTC AGATAAAAAA TCAAAAACTC GCTATTTGGT TTGGTTTTTT ATTCGGCATC ATAGGCGTAC ATAAGTTCTA TTTAGGTCAA TACGGAATGG GCAGTTTGTA CCTGGTGTTT AGCTGGACCC TGGTACCAAT GATTATTGGC TGGGTCGATG CGATCCGCAC CATGAAGATG AGCTCATTTA ATTTTGAGCA ACGATATTAT CGTCGTGTAA TTCATAATTA TTGA
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Protein sequence | MAICPQCHTA QGLEALAGVD PNIQIKNQKL AIWFGFLFGI IGVHKFYLGQ YGMGSLYLVF SWTLVPMIIG WVDAIRTMKM SSFNFEQRYY RRVIHNY
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