| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3629 |
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| Symbol | |
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| ID | 5612404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4418556 |
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| End bp | 4419452 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934582 |
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| Product | band 7 protein |
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| Protein accession | YP_001475361 |
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| Protein GI | 157376761 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00841169 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00129487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGAAC AAAAGTTAAA GTCCCCCAAG TTTTTCAAAT CAATCTCAAT CGTTAAATTC
CTGCCACTTA TTTTGTTGAT TATCGCCCTG TTCAATTCCT ATTTTATTGT CATTGAAGGC
CATGTCGGCG TGGTAAAGCG TTTCGGTGAA GCAAAGGGGC AAGAAAACCC AGGCTTACAC
TTTAAGATCC CCTTCATTGA AACCGTCGAG ATGATCGAGG TGCGCACGCG TAAAAATGCA
GAAAAAATGG CATCGAGCAC CAAAGAGCAG ATGCCGGTCA CCGTCGAAGT ATCCGTTAAC
TGGACGGTTA ACAAAGAGGC GGCACTCGAT CTATTCAAGC GTTATGGTGG CTTAACTCAA
TTTGAACAAC GTATTTTAGA CCCACGTTTT CGCTCTGCCA CCAAGGATAC GATTCCGCAA
TTCGAAGCGG AACAACTCAT TCAAGACAGA GCCAGTGCGA TTCAAGGCAT AGAACGCCGC
TTGGCCGAAG AGATGGAAGG CTTCCCGGTT GTGGTAGATA ACATTCAAAT TGAGAATATT
ATTCTGCCGC AAAAGTACAT TAACTCGATA GAGATCAAAC AGACCGAGAA AAACCTCGCG
GCGGCAGAGG AACACAAGCT CGAACGTCAA CGCCTCGAAG CCTTAAGAGC GGTCAACACC
GCCGATGCCA GAGCGAAAGG GATTTTGAAG ATCGCCGAAG CTGAAGCACA ATCCATTTTG
TTGAAAGGTA AAGCCGAAGC GCAGGCGATC GATGCAAAAG CTAAAGCCCT CAAGAATAAT
CCATTGATTG TGAAGCTTAC CGAAGCACAG GCCTGGGACG GCAAACTGCC ATCGACTATG
ATGGGGGAAG GCGTTATGCC AATCATGGAT ATCAGAGATA AGTCAGAGTC GAATTAA
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| Protein sequence | MLEQKLKSPK FFKSISIVKF LPLILLIIAL FNSYFIVIEG HVGVVKRFGE AKGQENPGLH
FKIPFIETVE MIEVRTRKNA EKMASSTKEQ MPVTVEVSVN WTVNKEAALD LFKRYGGLTQ
FEQRILDPRF RSATKDTIPQ FEAEQLIQDR ASAIQGIERR LAEEMEGFPV VVDNIQIENI
ILPQKYINSI EIKQTEKNLA AAEEHKLERQ RLEALRAVNT ADARAKGILK IAEAEAQSIL
LKGKAEAQAI DAKAKALKNN PLIVKLTEAQ AWDGKLPSTM MGEGVMPIMD IRDKSESN
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