| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3595 |
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| Symbol | |
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| ID | 5613427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4382745 |
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| End bp | 4383779 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934548 |
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| Product | dihydroorotase |
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| Protein accession | YP_001475327 |
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| Protein GI | 157376727 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0418] Dihydroorotase |
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| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA TCACCCTACT TACCCCCGAC GATTGGCACC TTCACTTCCG TGACGGTGAT
ATGTTAAAAG AAACCGTGCC TGCCACGGCC AGACTCTTCC AACGTGCTAT CGTCATGCCA
AACCTATTGC CACCAGTGAC CGATGCGAAA ATGGTTATTG AGTACCGTGA GCGTATTTTG
GCCGCGCGTC CAGAGGGCTC TGATTTCGAG CCTCTTATGA CTCTCTTTTT AACCAATGAC
ACCACTGAGC AGGACATCAT AGATGCCAAA GCGGCGGGTG TTGTGGCGGC TAAGCTTTAC
CCTGCTGGCG CGACCACCAA CTCAGACGCG GCGGTAAAAG CACTCGATGC ACTCTTCCCT
ATTTTTGAAA AGATGGCCGA AGTGGGTATG TTACTTCTGG TTCACGGCGA AGTGACTGAG
TCTCATATCG ATATATTCGA CCGCGAAGCC CTGTTTATCG AACGAAACCT AAGGCGTATC
GTCGACGCTT TCCCAACTCT TAAAGTGGTA TTCGAGCATA TCACCACTAA AGAAGCGGCC
GATTTTGTGA TGTCTGCCTC TGACAATGTG GCTGCAACCA TCACGCCTCA ACATCTGCTA
CTTAACCGTA ACGACCTCTT AGTTGGCGGC GTGCGCCCGC ACAACTTCTG CCTGCCGGTT
CTTAAGCGCA ACATTCACCA GGAAGCACTG CGCGCAGCAA TAGCAACCGG ATCGAGTAAG
TTCTTCTTAG GCACTGATTC GGCGCCTCAC GAGAAGCATC GTAAAGAGTC TGCCTGTGGC
TGCGCCGGTT GTTACAGTGC CTGGAGTGCA CTGGAACTCT ACGCACAAGT TTTCGATGAC
TTAGGTATCA TCGACAAGCT TGAAGGCTTT GCCAGTATTC ATGGCCCGGA TTTCTATGGC
CTGCCAAGAA ACACCAGTAC CGTCACTCTG GTCAAAGAGA AGTGGACGGT ACCGAGCGAG
ATCATCTTGC CAAACGGTAA CCCAATCGTG CCTTTCTTCG CCGGTGAAGA GGTAAGCTGG
AAGGTTAAGA GTTAA
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| Protein sequence | MTQITLLTPD DWHLHFRDGD MLKETVPATA RLFQRAIVMP NLLPPVTDAK MVIEYRERIL
AARPEGSDFE PLMTLFLTND TTEQDIIDAK AAGVVAAKLY PAGATTNSDA AVKALDALFP
IFEKMAEVGM LLLVHGEVTE SHIDIFDREA LFIERNLRRI VDAFPTLKVV FEHITTKEAA
DFVMSASDNV AATITPQHLL LNRNDLLVGG VRPHNFCLPV LKRNIHQEAL RAAIATGSSK
FFLGTDSAPH EKHRKESACG CAGCYSAWSA LELYAQVFDD LGIIDKLEGF ASIHGPDFYG
LPRNTSTVTL VKEKWTVPSE IILPNGNPIV PFFAGEEVSW KVKS
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