| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3589 |
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| Symbol | |
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| ID | 5613524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4377318 |
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| End bp | 4378274 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934542 |
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| Product | transcriptional regulator-like protein |
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| Protein accession | YP_001475321 |
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| Protein GI | 157376721 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTA AGTTTAAGCA GAATAATCTC TTTGATATCC AGGTCTTTGT ACTTCTTTAT
GAGTCATTAA ATTCAACATT AGTGGGTCAG GCTCTGAATG TACCCGCCTC CAAGATAAGC
CGAAGTTTGA AGGCATTACG CCACTCTCTC GATGCCCCTC TGTTCATCCG TAAACAGCAC
GGTTTCGAAC GCAGCGAGTT TGCCGATGAG ATCTATCCGT CGATGAAAAA AATCATCCAG
ATTGCGGAGA ATTGTAGTCG TCTCAATATT GAATCGGATA ATACCCATAA GAAAGAAATT
GTTATCGCCT GCCCGCCACT ACTTTCATCA AATCTGAGTC GTCTATTACA AGATAAGGCG
ACCGAACATC AGAAAAACTA CCTTTTTAAT ATTAAACCCT GTACTGGTGA TGTCGGCAGC
TTGATAAAAC AGAAAGAGAT CGATCTGTCC ATCACCCACA GAGCCTATAA TACCGAGCAG
CTGCAATCGG ACTTTATCGC CGAGGGAGAA TCGCTATTTC TTGTCGGTAA CAAGAGCCAC
CCTATCTGGG AAACCACTAA CCCCACGGCA TTAGATAATA TTCTCAAACA AGCCTATATC
GTTGTCGACA TGCCAGAGTT CAGTGATCCC AGAGATCCGT TAGAGTTCTA CGCAAAAGAT
CAGGGAGTGG AGCTCAATAT CGAGGCGAAG GTCAGTGGAC TTGCCGATCT TGGCGCACTG
CTGGAAACCA GCAACGGCAT GGCTTTGCTA AGCTCTTTAA GCGCAATAAG CTTTCTTAAT
AAGAATAGTG ATATTCGCTC GATGAGATTG TCCGCAGAGC AACAACTCCA ACTTTGTCAG
AGGAGCGGTC TTCCCCGCCA TTATTTGACC AAAAGAAAGC AAAACCACCA GATCCCCAGC
TGGTTACAGC TAGCAATAAC GCAATTTATA TACGACAACG TCGCATTAAA AGCCTGA
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| Protein sequence | MMSKFKQNNL FDIQVFVLLY ESLNSTLVGQ ALNVPASKIS RSLKALRHSL DAPLFIRKQH
GFERSEFADE IYPSMKKIIQ IAENCSRLNI ESDNTHKKEI VIACPPLLSS NLSRLLQDKA
TEHQKNYLFN IKPCTGDVGS LIKQKEIDLS ITHRAYNTEQ LQSDFIAEGE SLFLVGNKSH
PIWETTNPTA LDNILKQAYI VVDMPEFSDP RDPLEFYAKD QGVELNIEAK VSGLADLGAL
LETSNGMALL SSLSAISFLN KNSDIRSMRL SAEQQLQLCQ RSGLPRHYLT KRKQNHQIPS
WLQLAITQFI YDNVALKA
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