| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3529 |
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| Symbol | |
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| ID | 5612098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4299168 |
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| End bp | 4300052 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640934482 |
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| Product | 3-oxoadipate enol-lactonase |
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| Protein accession | YP_001475261 |
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| Protein GI | 157376661 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCAAC AGATAAAAAC TGAAAAAGTG ATCTTAGCCA ATGGCGAGCA GATATATTAT
CGGGAGTCCG GAAAGGGACC TGTTTTGGTC TTACTGCATG GCAATATGAC TTCATCTTTT
CATCTTGAAG AGTTCATTAA ATCCATCTCT TCAGGGGTAA GAGTCATTGC TCCTGATATG
CGTGGATTTG GATTGTCGAG TTATAAGCAG CCCATTTCCA GCTTGAATGA ACTCTCAGAT
GATGTTGCAG ATCTTTTGAA TCAACTCAAT GTTGAACACT ATGCCATAGC TGGTTGGTCA
ACCGGTGGTG GTGTTGCGAT GCAGCACTGT ATCGATCATA GAGAAAAAGT CAGCCAGCTT
GTACTGATGA GTAGCATAGG GATTACCGGT TACCCGATTA AGTCTAATGG AGGACAAGGG
GACTACCTTA AGAGCAAGCA AGCCATACTG GATGATCCTA TGTTTGCTCC GGTTTTTTCA
GCTTTTGAAA ATAACGATAA GGCTTTCGTT CGTGGTCTGT GGGATATGGT GGTCTACAAC
CATAAGAAGC CGGCTGCAGA AACCTATGAA TTGCTTATCG ATGATGTGCT GACTCAAGTG
AACTTAGCCG ATATCTATTT TTCCTTATCA GTCTTTAACT TAAGTGATGA CTCTAACGGA
GTTATTCATG GAAACAGCCA GATACATAAA TTTAAAACGC CTACCTTGAT CTTACACGGT
GATGATGACT TGGTTATTCC CGTAGGCACA GCGCTAAATA CTCATCGGGA ACTGAAAGAG
TGCGGTGAGC TGGTTTCGTT AAAAACCTAT CCGAACAGCG GTCATTCTTT GTTTATCGAT
CAAATTCAAG ATATCAGTCA TCAAGTTCTG ACTTTTATAA AATAA
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| Protein sequence | MCQQIKTEKV ILANGEQIYY RESGKGPVLV LLHGNMTSSF HLEEFIKSIS SGVRVIAPDM
RGFGLSSYKQ PISSLNELSD DVADLLNQLN VEHYAIAGWS TGGGVAMQHC IDHREKVSQL
VLMSSIGITG YPIKSNGGQG DYLKSKQAIL DDPMFAPVFS AFENNDKAFV RGLWDMVVYN
HKKPAAETYE LLIDDVLTQV NLADIYFSLS VFNLSDDSNG VIHGNSQIHK FKTPTLILHG
DDDLVIPVGT ALNTHRELKE CGELVSLKTY PNSGHSLFID QIQDISHQVL TFIK
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