| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3448 |
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| Symbol | |
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| ID | 5610731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4197921 |
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| End bp | 4198793 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934388 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475180 |
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| Protein GI | 157376580 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATCT TGTTTACCTT TCTCGCCGCG TCCATGCAGG CTTGGCGTAA TGCCTTTCAG
AGCCAACTGA GCAGAGAGGT GAAAGTCGCC GGTGTCACCC TGGCGCGTTT TCTCTGGGCC
GGCCCCATAG CAGGGCTATA CCTGTTGATA CTCTATCTAT GGCGACCGGT GGAGTTACCC
GAGTTCTCAT CTGCCTTCTC GCTTTATGTG CTCGGGGCTT CGGCAATGCA GATTGTAGCT
ACGGCCTTGA TGGTGAAGTT ATTTAAACTG AAAAACTTTG CCGTTGGCGC CGGGCTTGCC
AAGAGTGAGG CCTTAGTGGC TGCGGTATTG GGGGTTCTCT TTTTCGGTAC TCAGCTTTCG
TTGCTGGGCT GGCTCGGTGT GATTATCGGC GGCATCGCAG TCTTCCTGAT GAGCAGCCGT
AAGGGATTAA AGGATATCTC CTTACAGACC GCGTCAATCG GGCTGGCTTG CGGCAGCGCA
TTTGCGCTGA CATCACTGTG GGTGCGTGAG GCGAGCCTGA ATTTAGACCT GCCTTTTCCT
CACCGGGCGG CCTGGGTTTT ACTATTTGTG ATAACGATTC AAACCATCGT GCTGCTGGCA
TATCTCTATG CTTCTGATAA GCAGACCTTA ACGGCACTCT GGCAGCGCCC CAAGCTGACC
CTGCTGACCA GTATCACCAG CTGTTTGGGT TCCATAGGCT GGTTTAGTGC CATGTCCCTG
CAGGCCGTGC CCTATGTCAA AACATTGGGA CAGATAGAGG TATTTTTCAC TTTGCTGATT
GCCATGTTCT GGCTAAAGCA GAAGGTCAAA ATTAAAGAGG TATTTGCCTT AGTCTTGATA
GCTGTTGCAG CCATATTGGT GATGTGGGGT TAA
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| Protein sequence | MWILFTFLAA SMQAWRNAFQ SQLSREVKVA GVTLARFLWA GPIAGLYLLI LYLWRPVELP
EFSSAFSLYV LGASAMQIVA TALMVKLFKL KNFAVGAGLA KSEALVAAVL GVLFFGTQLS
LLGWLGVIIG GIAVFLMSSR KGLKDISLQT ASIGLACGSA FALTSLWVRE ASLNLDLPFP
HRAAWVLLFV ITIQTIVLLA YLYASDKQTL TALWQRPKLT LLTSITSCLG SIGWFSAMSL
QAVPYVKTLG QIEVFFTLLI AMFWLKQKVK IKEVFALVLI AVAAILVMWG
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