| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3444 |
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| Symbol | |
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| ID | 5610923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4193786 |
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| End bp | 4194226 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934384 |
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| Product | VanZ family protein |
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| Protein accession | YP_001475176 |
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| Protein GI | 157376576 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5652] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000207226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGATA TTCTTGGTGA CAATCTGCCA CCATTTTTCT ATGATGGCAC AAACAACAAA
ACTTCCATCG ACATAGTGAT ATCAAGACGA AACATATTTA AACTGGCGCT GGCCATAGCC
CTGATAGTCA TCAGTTACCT GGTTTTTTCC AGGCCCAACT ACCCTCAACT GATCCCTCAT
ATGGACAAAG TTGGGCACCT TGGTAGTTTC TTCTGTCTCT CTTACCTGAC CCACTTAGCG
TTCAAGCCCA GATGGCAATA TCTGGCTATT ACTCTTGCCG GTTATGCTGT TTTCATTGAA
CTGGTTCAGT CCACGCTGCC TTATCGCAGC GCATCGGTCG GCGACTTCAT TGCCGATATG
GCCGGAGTCA TGCTGTTCTA TCTGTGCCAT TGGAGCTACC TTCGTTATTT CCGTGCAGCT
AAGCTCACTG AATCCGAATA A
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| Protein sequence | MDDILGDNLP PFFYDGTNNK TSIDIVISRR NIFKLALAIA LIVISYLVFS RPNYPQLIPH
MDKVGHLGSF FCLSYLTHLA FKPRWQYLAI TLAGYAVFIE LVQSTLPYRS ASVGDFIADM
AGVMLFYLCH WSYLRYFRAA KLTESE
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