| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3395 |
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| Symbol | |
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| ID | 5610347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4138066 |
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| End bp | 4138908 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934335 |
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| Product | dihydropteroate synthase |
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| Protein accession | YP_001475127 |
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| Protein GI | 157376527 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
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| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000218907 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0003141 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTTCAAA TTATCAGTGG TAACAAAAGC CTCTCTCTCG AAAAGCCATT AGTGATGGGT
ATCCTCAATG TCACCCCCGA TTCGTTTTCC GATGGTGGTG AATATTCCAG CTTCGAATTA
GCATGCAAGC ATGCCGATGA GATGGTCGAA CAAGGTGCGA GCTTAATCGA TATCGGTGGT
GAGTCGACAA GACCCGGTGC CGCCGATGTA AACCTATGCG AAGAGCTTAG CCGAGTGATC
CCTCTGGTTG AGTATATTGC TCAGCGTCAT GATGTTTGGA TATCTATCGA TACCAGCAAA
GCCGAAGTGA TGAAGCAAGC AGTAGAAGCG GGCGCTCATC TTATCAACGA CGTACGTGCG
CTACAAGAAC CCGGCGCTCT AGAGATGGCG GCCAAGTTAC GAGTCCCTGT TTGTTTGATG
CATATGCAAG GGCAACCCAG AAGTATGCAG ACAGCACCTG TCTATAGCGA TGTTGTGGAT
GAAATAAAAC TTTTTTTTGA ACAGCGTATT CAGGCGTGTT GCGATGCGGG ACTGAAACGA
GAGCAATTGC TTATTGACCC GGGGTTTGGT TTCGGCAAAT CTTTAGCGCA TAATTATGAG
TTACTCAACA GGCTCGAGGA GTTCAAGTCA TTGGGTGCAC CAATACTTGT CGGCCTATCT
CGTAAGAGTA TGATGGGGAA CCTGCTTAGC CGTGATGTGT CTGGGCGTCT TGCTGGAAGT
TTGGCTGGTG CCATGCTCTC GGCTCAGCGA GGTGCGGACA TTCTCAGAGT ACACGATGTC
CCTGAGACGG TGGATGTGTT GAAGGTGCTG GATGCGACGC GTCATTTCGG TCAGTTGCAA
TAG
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| Protein sequence | MFQIISGNKS LSLEKPLVMG ILNVTPDSFS DGGEYSSFEL ACKHADEMVE QGASLIDIGG
ESTRPGAADV NLCEELSRVI PLVEYIAQRH DVWISIDTSK AEVMKQAVEA GAHLINDVRA
LQEPGALEMA AKLRVPVCLM HMQGQPRSMQ TAPVYSDVVD EIKLFFEQRI QACCDAGLKR
EQLLIDPGFG FGKSLAHNYE LLNRLEEFKS LGAPILVGLS RKSMMGNLLS RDVSGRLAGS
LAGAMLSAQR GADILRVHDV PETVDVLKVL DATRHFGQLQ
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