| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3291 |
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| Symbol | |
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| ID | 5611582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3999883 |
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| End bp | 4000554 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934229 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475023 |
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| Protein GI | 157376423 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5587] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02453] conserved hypothetical protein TIGR02453 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000232974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTAGTC AGGAAAGTTT TTCGTTTTTA TCTCTGCTCG CCAGTAACAA TGAGCGCGAA
TGGTTCAAAT CCCATCAGGC TCGATATGAA GATGAGGTGC GCACGCCGGC ACTCAAATTC
ATCGAAGCCA TGCAGCCGCA TATAGTCTCC CTCTCGCCCA GACTGACGGC GGTGCCTAAG
AAGGTGGGTG GCAGCTTGAT GCGGCCACAG CGTGATGCCA GGTTCAGTAA AGATAAGACC
CCCTACAAAA CCAATGTCGG CATTCAGTTC AGGCATTTTC AGGGCAAAGA TGTCCACGCC
CCGGGTTTAT ATCTGCATAT CGCCAACGAA GGTTGCTTTC TCGGTGCCGG AATTTGGCAC
CCCGATTCGA AGGCGCTAAA CAAGATCCGC ACCTGTCTCG ATGAGAACCC CAATGCCTAT
AAGAAAGCGC TGGCGCAATT GAGAGCCGGA GGGTTTGAGA TGGAGGGAGA TAGCTTAGTG
CGCCCACCGC GTGGCTATGA TAAAGCCCAC CCCATGCTCG AGGAGCTTAA ACGAAAAGAC
TTTATCGCTA TCAAGAATAT CGACGCCAAG CAGATATACG ACAAAGATTT TGTGAATTGG
TGTGCCAATG AATTCAAGCA GACTCAGAAG CTGATGGGTT ATTTGTGCTT CGCGTTGGAT
CTGGATTACT GA
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| Protein sequence | MFSQESFSFL SLLASNNERE WFKSHQARYE DEVRTPALKF IEAMQPHIVS LSPRLTAVPK
KVGGSLMRPQ RDARFSKDKT PYKTNVGIQF RHFQGKDVHA PGLYLHIANE GCFLGAGIWH
PDSKALNKIR TCLDENPNAY KKALAQLRAG GFEMEGDSLV RPPRGYDKAH PMLEELKRKD
FIAIKNIDAK QIYDKDFVNW CANEFKQTQK LMGYLCFALD LDY
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