Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3235 |
Symbol | |
ID | 5614061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 3928419 |
End bp | 3929552 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640934173 |
Product | hypothetical protein |
Protein accession | YP_001474967 |
Protein GI | 157376367 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA CTAACAAAAC GTTTTATATC TCTCTTATTG CAAGTGCTAT TGCATTAAGT AGCTTCAACA CCATGGCTGC CGCTGAAGAA GATGGCATTA ATATCCACGG TGGCGTGCGT ATTAACTACT CATATAAAGA TTACAGCGAG AGTTCAAAAG ATAAAGGTGG TGATCTGACA TTTAACATGG CGTCACTAAG ATTTGACGGT AAGCATGGTA ACTGGGGATT AAAGTCGGAT TACCGTTTCA CTGCCGACAC TAACTATATC AAATATGGCT ACGGCTTCTA CGATTTCAAT CCTGAGTGGG AACTTCAGTT CGGTATTAAC CAAGTGCCAT TTGGCAACCT GGGATATATC TCTAACAGCT ATTGGTTTGG CCTCCCCTAC TACCTTGGTT TCGAAGACGA CTATGATATT GGTGTAAAAG CCACCTTTGA GAAAAACGGT TGGCACACAG ATATGGCTTT CTATAAGAGC GCCGAATATG GACCAAGCGA AAACAAACAG TACGCAGCCG ACCTGTATAC CGGCACTATC AACGGTACCG AGTATAACAA CGAAGAGACA AACCAGCTTA ACCTTCGCCA AACCTACACC ATGGAACACC AGGGCGGCTC AACCACTTTT GGTGGCTCGG TTGAAGTTGG CCAGATCTAT AACGCTAAAA CCGGTAACAA TGGCGACAGA TATGCCGTTG CCGCTAGCCT TGACAGCAAG TTCCATGGCT GGAACCTGCA ACTTCAAGCC ATGCAGTATG AGTATGATGC AGCCGATAGC GCGGATGACA ACAAGATCGC CATCGCAGTG GTCAGCTGGC AGTATGAAAT TGCCTCTAAG GCACAGGTAT ACAGTATCAA CCTGGCAAAA ACGATCCCGA CCGATTGGGG TAGCGTAAAG TTCTACAATG ACTTCGGCCT AATGACACCG GATGTTGCCG ACGAAACCTA CGATGACAGT ATGCAAAACG TGTTAGGCGC CGCGATCGCA GCAGGTCCTA CTTACACCCA AATCGACTTC ATCATGGGTA AGAACATGAC CTTCTCAACG GCAAACAACG ACCATATCGG TCTGCCTGAA GTCGGTGATG ATTGGGACAA GCGCTTCAAC ATCTCCATGG CTTACTACTT CTAA
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Protein sequence | MMKTNKTFYI SLIASAIALS SFNTMAAAEE DGINIHGGVR INYSYKDYSE SSKDKGGDLT FNMASLRFDG KHGNWGLKSD YRFTADTNYI KYGYGFYDFN PEWELQFGIN QVPFGNLGYI SNSYWFGLPY YLGFEDDYDI GVKATFEKNG WHTDMAFYKS AEYGPSENKQ YAADLYTGTI NGTEYNNEET NQLNLRQTYT MEHQGGSTTF GGSVEVGQIY NAKTGNNGDR YAVAASLDSK FHGWNLQLQA MQYEYDAADS ADDNKIAIAV VSWQYEIASK AQVYSINLAK TIPTDWGSVK FYNDFGLMTP DVADETYDDS MQNVLGAAIA AGPTYTQIDF IMGKNMTFST ANNDHIGLPE VGDDWDKRFN ISMAYYF
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