| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3224 |
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| Symbol | |
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| ID | 5613799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3914060 |
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| End bp | 3914911 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934162 |
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| Product | 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase |
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| Protein accession | YP_001474956 |
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| Protein GI | 157376356 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2030] Acyl dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAA AGTTAGAGAT GCAGGGGCAG ACCTATGGTC CGTTCATTAA TGAATATACC
GAAAGGGATG TCATGCTGTT TGCACTGGGT TGCGGTGCGG CTAGCGACGG AAAAACAGAT
TTAGACTATG TGTATGAAAA GAATTTAAAA GTACTACCTA TGTTTGCGGC AATCCAAATT
GTCGACGCCG AAGTGACCAA GACCATAGAT TACGGTTTCG AGTGGGGCGG CTCTCTGCAC
TGGGGCTTCG ATCTCCGTAT TCATCAGCCA TTGCCCACCT GTCCCGGTAA ACTAAGTACA
AAAGTATTGT TAAAAGGCCT GTTCGACCGT GGCGAAGGTC GTGGCTGCCT GGCTCAGCAT
ATCGGCGAAA CCTTCGATGA AGCCGGCACT AAACTCTTTA CCAATGAAAG CTGGGACTGC
GCCCTCTATG ACGGCGGTTT CGGTGGTCCC AAGGCGCCCA GAGACATAGT TGAGATGCCG
GAGCGGGCAC CGGATTTTGA AATTGAACAA GCTATCCCGC TGAATCAGGC GCTTATCTAT
CGATTATCCG GCGACGACCA TCCTCAGCAT GTCGACTGGG AGTATGCTAG GGAATTTGGT
CACCCTAAGC CGAACCTACA TGGCGTGAGC ACGGCCGGTG TTGCCTGTCG CCACATTATT
CAGGCGATGT TTCCCGGCGA ACCTGAACGT CTGACGCGCT TTAAGACTCG CCTGACTAAA
TCTTTGTACC CGGGCAGCAC GGTGAAGACC CAAATCTGGA GATGGGACGA TAACTGCATT
CATTTCAGAA TGGTGGATGC CAACGATCCG GAGATGGTCT ATCTGAACTT TGGCCTAATC
GAGTGGAATT AG
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| Protein sequence | MALKLEMQGQ TYGPFINEYT ERDVMLFALG CGAASDGKTD LDYVYEKNLK VLPMFAAIQI
VDAEVTKTID YGFEWGGSLH WGFDLRIHQP LPTCPGKLST KVLLKGLFDR GEGRGCLAQH
IGETFDEAGT KLFTNESWDC ALYDGGFGGP KAPRDIVEMP ERAPDFEIEQ AIPLNQALIY
RLSGDDHPQH VDWEYAREFG HPKPNLHGVS TAGVACRHII QAMFPGEPER LTRFKTRLTK
SLYPGSTVKT QIWRWDDNCI HFRMVDANDP EMVYLNFGLI EWN
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