| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3110 |
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| Symbol | |
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| ID | 5611695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3747999 |
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| End bp | 3748922 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934048 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474842 |
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| Protein GI | 157376242 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAACA GGTTTGATTT ACGCGCGCCT TCATTACTAC TTACTCTTCT TTTATCTCTG
CTCTACTCGT TTCAAGCTTT CGCTGATAGA CCAAAAGGTC ATTATCCTTT CAGTATTAGC
GCATCAAGGA TAGGTACTGC CGAAGCCGAT GTTGGTGGTG GACCGCAGTC ACTTCAAAGG
GAGTCATGGC TATTCGATGC CAAAGCAAAC TATTCTGTGA ACCGCCAATG GTCGTTAGGC
GTTAACTTAG GTTATGCAGA TCTGGACTAT GACTGGGGGA ACAGAGGTTC TACACTATTC
GATGGTAACC TCAGCAGCTG GCAAAAGGTC CAACGATACA GTGCCGGGCT CTCTGTGAGT
TACCGTCCTG ATAAACATTG GATGTTTCTG TTGGCACCAA AGTTACAATA TGCCTCTGCC
GATACAGCGC CTGTCAGTGA TGCAGCCAGT TATGGTGTGG TCGCATCCGC GATGTACCGA
TTTGATAATG GTAACTTATT GGGAGTAGGT GTGGCTTATC TGAATGATAT TTCTGAGGTC
AGAACCGTGC CATACCTTGC AGTTAATTGG CGGATAAATG AATCGTGGCG GTTAGGCAAT
CCATTTTCCG CTGGTTTTAC AGGTCCTGCT GGTTTAGAGC TGAGTTATCG ATTGAATCCA
AGTATCGACT TTGGCTTGGG CAGTTCGAAG CGTACGCAAC GATTCTTGGT TGAAGATGAT
GATGTTACCG TTGAAATCGA TGAGTGGGTA AGCTTTCTTC GGGTAGGCTG GAAGCTTAAT
CGTTCGTTAT CTTTCAATGC TTATGCTGGG TACTACTTCA ATGGAGAGCT GGAGCTAAGC
GAAGCACCAA TGGATAGCGG GGAGCGTACA GAAGAGATTG ATAATCAAAC TGCGCTGGCG
CTGGCGGTTG AATATAAGTT CTAA
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| Protein sequence | MGNRFDLRAP SLLLTLLLSL LYSFQAFADR PKGHYPFSIS ASRIGTAEAD VGGGPQSLQR
ESWLFDAKAN YSVNRQWSLG VNLGYADLDY DWGNRGSTLF DGNLSSWQKV QRYSAGLSVS
YRPDKHWMFL LAPKLQYASA DTAPVSDAAS YGVVASAMYR FDNGNLLGVG VAYLNDISEV
RTVPYLAVNW RINESWRLGN PFSAGFTGPA GLELSYRLNP SIDFGLGSSK RTQRFLVEDD
DVTVEIDEWV SFLRVGWKLN RSLSFNAYAG YYFNGELELS EAPMDSGERT EEIDNQTALA
LAVEYKF
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