Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3035 |
Symbol | |
ID | 5613367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 3669088 |
End bp | 3669417 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640933972 |
Product | S23 ribosomal |
Protein accession | YP_001474767 |
Protein GI | 157376167 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.964559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00587494 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGTATTAC TCTTTGAATG TAGTCGTGAT CGTGGTTTTA AGGACCAAGT CACCAGAGCC GCTCTTTCTA TCCCATCCAA TATTGCAGAA GGGGAGGAGA GAGGCACACC TAAAGATTCT GCAAGATTCC TCTATTATTC CAAAGGTTCA GCCGGAGAGT TGGTTACACA GCTATATATC GCCATTGAAA TAGGTTTAGT CGATAAAACT AAAGCATTAC AGCTGATAGA TGAAACCAAA CAGTTATCCG CAATGTTGGC TGCTTTGATC AAAATACGCA AAGGTGAAGT GTATGAATGC CCTGCAGGAT ATCAGGCTAA GGAAGACTGA
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Protein sequence | MVLLFECSRD RGFKDQVTRA ALSIPSNIAE GEERGTPKDS ARFLYYSKGS AGELVTQLYI AIEIGLVDKT KALQLIDETK QLSAMLAALI KIRKGEVYEC PAGYQAKED
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