| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2578 |
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| Symbol | |
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| ID | 5610876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 3127820 |
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| End bp | 3128878 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933497 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001474313 |
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| Protein GI | 157375713 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.711518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAA CTATTCCAAA GACCATGATG GGCATTCAGC TTATCGGTCA TGGTGGCCCG
GAAATGCTCC AATACCGTGA TGATATTCCA GTCCCAACGC CAAATCCAAA TGAAGTGCTG
ATCCGCGTCT CTGCCGCTGG AGTTAACAAT ACCGACATCA ATACCAGGAC AGCCTGGTAC
TCGAAAAACG ATGGCAGTAG CTCCGATGCA AGCTGGTCTG GTAACACCTT CGTTTTCCCT
CGCATTCAAG GAGCTGATGT CTGTGGCACT ATCGTTGCCG TAGGTGATAA CGTCAGTACA
AAACGTATCG GGGAACGAGT TCTGATCGAA CCTTGCCTTA GCGAAGCCAA TGGCCAGCCA
CTTAACTCTC CTTGGTACTA TGGCTCTGAA TGTGATGGAG GATTTGCACA ATACACAGTG
GTCGCAGACA AGCATGCCTA CGCGGTGAAT AGCCCTCTGT CTGACATCGA ATTGGCTTCA
TTTCCTTGCT CATATTCAAC AGCTGAGAAT ATGCTTACCC GAGCGAACGT CACGTCACTG
GACAAAGTGT TGATATCTGG CGCCTCTGGC GGTGTTGGCT CGGCAGCGAT TCAGCTTGCC
AAATCTCGCG GAGCGTATGT TATCGCCATT ACCAGCCCAA GCAAAAACCA ACAACTGCTG
GAACTGGGAG CAGACCAAGT AATATCGCGA GATACTGACT CAGTCGAAGC GCTAGGTGAA
AACAGTGTTG ATGTAGTTAT CGATCTAGTC GCAGGAAAGC AGTGGCCTCA GTTTTTACGA
CTGTTAAGAC CTGGCGGCCG ATACGCAGTG TCAGGTGCGA TTGGCGGAGC CTTGGTTGAG
TTGGATGTCA GAACACTATA TCTGAAAGAT TTAAGCTTTT TCGGCTGCAC TGTGCTTGAG
CCAGAAGTAT TCCAAAACTT AGTTAACTGT ATCGAACAAG GTAAAATAAC CCCAATCGTT
GCGCAAACTT TCCAACTGAA AGAGATAAAT AAGGCTCAAG ATATTTTCTT GAAAAAGAAT
CATGTAGGTA AAATTGTCCT AAAGGTATCA GAGCAATAA
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| Protein sequence | MMTTIPKTMM GIQLIGHGGP EMLQYRDDIP VPTPNPNEVL IRVSAAGVNN TDINTRTAWY
SKNDGSSSDA SWSGNTFVFP RIQGADVCGT IVAVGDNVST KRIGERVLIE PCLSEANGQP
LNSPWYYGSE CDGGFAQYTV VADKHAYAVN SPLSDIELAS FPCSYSTAEN MLTRANVTSL
DKVLISGASG GVGSAAIQLA KSRGAYVIAI TSPSKNQQLL ELGADQVISR DTDSVEALGE
NSVDVVIDLV AGKQWPQFLR LLRPGGRYAV SGAIGGALVE LDVRTLYLKD LSFFGCTVLE
PEVFQNLVNC IEQGKITPIV AQTFQLKEIN KAQDIFLKKN HVGKIVLKVS EQ
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