| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2515 |
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| Symbol | |
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| ID | 5610060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3060589 |
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| End bp | 3061479 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640933434 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474250 |
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| Protein GI | 157375650 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00069207 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.734956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAT TGATGAAAGC TTGCAGTAAT CTAAATAAAA TTCAGCCGTT TATTATTAAG
ATGAAGCGCC CCGTTACCTT ACACAAGGCT GCGTTAGTTA TACCTCATTA CTTTCTTGTT
CTTACACTCA CTATGTTTCT ACTCTGGTTT TTTGTTTATG CATTGGGGTT AAATCAAGAG
TGGTTCCATC TCGTTAACAG TAATGCCGCC CATCACATCA ATGACCTGTT TTCAGCTCAT
GTTTCCGATC TGGGTAATGG TGCGATAATC GGTGTCTTTA CCATCGCACT GCTCGGTCGT
CATCCTAACT TTGCGAAACG TCTGTTGTTG ACTATTTTGT TGTGTTTTAC TGCCCTCTAT
TTTTTGAAGA ATGTATTTGC AGTCCCCAGA CCGGCCGCCA TTCTCGCGGT TGAAGAGATA
AATATTGTTG GCGAGCTATT AACAAAAAAT AGTTTTCCAT CCGGGCATAC AGCAACAGCT
TTTACACTGG CAGGCTTCGT TTTACTCTCT TTCCCTGGCG TGATATTACG CCTGTTAGTT
ATCATCATGG CATGTGGGGC CGGATGGGCT CGTATTGCGG TGGGGGCTCA TTGGCCTGAA
GATGTATTTT TCGGTGCAGG AATAGGGCTG GTGTTTGCCT GGGCTGGCGC ATATCTGAGT
CGAAGGGAAT TCAGCCCCGC GGCGAGTTAT GCTTGTTGTC TGTTTCTTAG TTTAGTCGCA
TTCATCACTA ACCTGACGCT TTATACTGAG TTTTCTGAAT TTGAAAGCAT TGTTCAAACT
CATACTCTAT TCATTGTTTT GTCGGCAATG TTAGTCATCT ACTTCTTTAC ACGTCTGTTA
ATGTTATCGC GAGTCAGTCA AATGCTAACC AGACCCTTGG TTAAGCTTTG A
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| Protein sequence | MQLLMKACSN LNKIQPFIIK MKRPVTLHKA ALVIPHYFLV LTLTMFLLWF FVYALGLNQE
WFHLVNSNAA HHINDLFSAH VSDLGNGAII GVFTIALLGR HPNFAKRLLL TILLCFTALY
FLKNVFAVPR PAAILAVEEI NIVGELLTKN SFPSGHTATA FTLAGFVLLS FPGVILRLLV
IIMACGAGWA RIAVGAHWPE DVFFGAGIGL VFAWAGAYLS RREFSPAASY ACCLFLSLVA
FITNLTLYTE FSEFESIVQT HTLFIVLSAM LVIYFFTRLL MLSRVSQMLT RPLVKL
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