| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2460 |
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| Symbol | |
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| ID | 5610850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2984771 |
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| End bp | 2985538 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640933375 |
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| Product | transposase InsF for insertion sequence IS3A/B/C/D/E/fA |
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| Protein accession | YP_001474197 |
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| Protein GI | 157375597 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.593171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.440757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTAACC GAGAAGCTGA AGATAAAAGA TTGCTAGGTA AGATTAAGCA ATTTTGGCTG
GAGAGTGGCT GTGTGTATGG TTATCGAAAT ATTACATTGG ACCTCAAGGA TGACGGTGAA
TCGGTTGGTA AAAATCGTGT GCATCGCATT ATGAAAGCTG CTCAGATTAA GGCTGTACGA
GGCTATAAGC GTAATCCAAG CTTTGGTGGT GGCGATGTTA GCCATACAGC ACCAAACACG
CTAAATCGTG GCTTTGATGT CGCTAAGCCT AACAAAGTTT GGGTGACCGA TTTTACTTAT
ATCCGCACCC ATGAAGGTTG GTTGTATCTA ACTGTTGTGA TCGACCTATT CTCACGACAA
GTTGTCGGTT GGACGATGAA AAGCACACCT AAGGCGGACT TGGTTATTGA CGCGCTATTG
ATGGCGATAT GGCGACGTTC TCCGACCGAA AAGGTACTGA TACATTCCGA TCAAGGTGTG
CAATATACCT GTTCAGACTG GCGTAGTTTT CTTAAAGAAC ACAACCTTGA AGCAAGTATG
AGCCGCAGAG GAAACTGTCA TGATAACGCT GTTGCAGAGA GCTTTTTCTC ACTCCTAAAG
AAGGATAGAG TTAAGCGAAA AGTCTACAAA ACCAGAGACG AAGCACGCTC TGAAATATTT
AACTATATAG AATATTTCTA TAATCCAGTT CGACATCATG GTAGTAATAA CGGACTGTCT
CCGATGAAGT TCGAAAAGCA GTATTTTGAG AAACTAGAAA GTGTCTAG
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| Protein sequence | MSNREAEDKR LLGKIKQFWL ESGCVYGYRN ITLDLKDDGE SVGKNRVHRI MKAAQIKAVR
GYKRNPSFGG GDVSHTAPNT LNRGFDVAKP NKVWVTDFTY IRTHEGWLYL TVVIDLFSRQ
VVGWTMKSTP KADLVIDALL MAIWRRSPTE KVLIHSDQGV QYTCSDWRSF LKEHNLEASM
SRRGNCHDNA VAESFFSLLK KDRVKRKVYK TRDEARSEIF NYIEYFYNPV RHHGSNNGLS
PMKFEKQYFE KLESV
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