| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2288 |
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| Symbol | pssA |
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| ID | 5611495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2772391 |
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| End bp | 2773704 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933198 |
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| Product | phosphatidylserine synthase |
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| Protein accession | YP_001474025 |
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| Protein GI | 157375425 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.288478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000206937 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTGAATA AGCTTGGTGG AATACCTGTC CAACCAGACG CCATACGTTG GTTGTTGACA
CCTAAAGGCC TCAAGGCCGA ATTATTAGAA CGTATTGCCT CTGCAGAGCA CTCGATTTAC
ATCTCAGCCC TCTATCTGGA AGATGATGAG GCAGGACGTG AGATCTTAAC TGCTTTAATG
TCTGCCAAGC AGCGCACACC TTCCATGGAT ATTAAGGTTT TGGTCGATTT CCATCGCGCC
AGGCGCGGTC TTATCGGTCA TAAAGGTGAC AGTGGTAATT ATCAGATGTA CCGTAAGGTC
ATGGCTGAGG CCGAGCACCC CATCGATATA TTGGGGGTAC CCGTTAAGTC TCGTGAATTT
ATGGGCGTCT TGCACCTAAA AGGCTTTATT GTCGATGATA CTGTCATCTA CAGTGGTGCC
AGCATCAATA ATATCTACCT GCATCAACAA GAGAAGTATC GCTTCGACAG GTATCATGTT
ATCGATTCTG CTGAGCTTGC GCGTTCCATG CGTCAGATGA TCCAGACCTA TCTTGTCGAA
GATATTGCCG TCTGTTCTCT TACTCAAGAT AAAGAATGTG AGCTGTTGCC AGAGAAAAAT
GATGTTCGTA GCCTGAAAAA CCGCCTTAGT AAGGCGCATT ATGAGTTTAC GAAGGTTAAC
CAGGGTAACC GGATAACACC GCTTGTAGGG CTGGGTCGTA AGAAGAACAG GTTAAATAAG
CTGGTCGTCG ATATGGTGGC ACAGTCTAAA GAGTCACTCT TTATCTGTAC GCCATACTTT
AACCCACCAT ACGTTCTTGC CAGAGCGATG GCAAAACATC TTAAGGATGG GAAACGAATA
GATATTGTTG TTGGTGATAA GACGGCTAAT GATTTCTATA TCCCACCTGA AGAGGAGTTC
TCTACCATTG GTGCTTTGCC ATACATGTAT GAGCAATCGT TACGGAAATT CGCCAAGAGA
CAGCAGTGGG CCATAGAATC GGGTCAGTTG AGCATACATC TTTGGAAAGA TGGTATTAAC
AGCTACCATC TTAAAGGCAT CAGTGCCGAT GATAAGTGCC ACCTGATCAC CGGCAGTAAT
TTGAACCCTC GTGCCTGGGC TTTGGATCTT GAAAATGGCC TGCTCTTGCA GGATGAGTCC
GGAGCCTGGA AAGAGAAGTT CCAAGTAGAG CAGGCGCACA TTCTTCAACA TACTGAGCGT
TTGTATCATT ACAGTCAGCT AGAGACATTA AATAACTATC CAGCGCCTGT GCGTAAGATA
ATGACGCGTA TCAGACGCCT TAAGGCTGAC TTCCTGCTAA GAAGAATTCT TTAG
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| Protein sequence | MLNKLGGIPV QPDAIRWLLT PKGLKAELLE RIASAEHSIY ISALYLEDDE AGREILTALM
SAKQRTPSMD IKVLVDFHRA RRGLIGHKGD SGNYQMYRKV MAEAEHPIDI LGVPVKSREF
MGVLHLKGFI VDDTVIYSGA SINNIYLHQQ EKYRFDRYHV IDSAELARSM RQMIQTYLVE
DIAVCSLTQD KECELLPEKN DVRSLKNRLS KAHYEFTKVN QGNRITPLVG LGRKKNRLNK
LVVDMVAQSK ESLFICTPYF NPPYVLARAM AKHLKDGKRI DIVVGDKTAN DFYIPPEEEF
STIGALPYMY EQSLRKFAKR QQWAIESGQL SIHLWKDGIN SYHLKGISAD DKCHLITGSN
LNPRAWALDL ENGLLLQDES GAWKEKFQVE QAHILQHTER LYHYSQLETL NNYPAPVRKI
MTRIRRLKAD FLLRRIL
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