| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2266 |
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| Symbol | |
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| ID | 5611815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2738810 |
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| End bp | 2740591 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640933176 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474003 |
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| Protein GI | 157375403 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.607101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTACC AAACACCAAT CACGATTAGA AGTGCCATAG AGAATATTAA AAAACGCCGC
TATCTTTTGC CATCTATTCA GCGCGAATTT GTTTGGGATA CGGACCAAAT TGAAACATTG
TTTGACTCAT TGATGCGTGA TTATCCTATC AGTACCTTTT TGTTTTGGAA GGTCGATAAG
AACAAAGTAA AAGATTTTCA GTTTTATGAA TTTTTAAATA ATTATCATGA AAAAGATAAC
CGACATAACC GTAAAGCAGA ACCTGCTGAT GACGAAGATA TCATTGCATT GTTAGATGGT
CAGCAACGAA TGACGTCAAT GTTTATCGCA CTTACGGGGA CGTATTCTAA AAAGATGCCT
TATTATCAAT GGAATAGTCC ACATGCTTTC CCTGCGAAGA AGTTGTATTT GAACCTATTA
AAGCCGTCTG ATGGACTTGA GGTTGAGTAT GACTTTAAAT TCTTAACAGA AGAGGACGCA
ACTCAAACCC ATGGCCATTA CTGGTTTGAA TGTGGGAAAA TTCTTGAGCT GACAGACATG
GGTAAGGTAT CCATGTTTAT GATGAAAAAT AAGCTAATGG ACACATCATT CTATACTGAG
AAAGAATCTG AATTTGCCAT TAATACACTG AGTGAGTTCT TCAAGGTTAT CCATGATAAA
GGCACCATTA GTTACTACCT TGAAAAAAGT GAAGAGTTAG ACAAAGTACT GCAAATATTT
ATTCGAATTA ACAGTGGTGG TACCAAGCTA AGTTATTCAG ACCTTTTACT ATCCATTGCA
ACGGCACAAT GGAAAGACAA GGATGCGCGT GAAGTTATCC ATGAGTTTGT CGATGACATA
AATCAAATTG GAGACGGCTT TAATTTTAAC AAAGATATTG TTTTAAAATC ATGTCTCGTA
CTTTCAGACT TTGATGTTAA GTTTAAAGTG GATAATTTCA CAAAAGAGAA CATGGCTCAA
ATTGAGCTGA ATTGGGATAA AATTTCAGCA GCTGTGTGTT CGAGTATCCA GTTGGTATCT
AAACTAGGTT TTAGTCGAGA AAATTTGGCG GCAACTAACA CTATTATTCC AATCGCTTAC
TTTATTTACA GAAATGGCTT TGAAAACAGC ATCCTCCATT CAGTACAGAG ATTTGAAGAT
CGGATAGCAG TTAAAGACTG GTTAGCTCGA GTGTTACTTA AAGGCACTTT TGGTGGACAG
CCTGATTCGA TTTATCCCAA GATGAGAGAT TTGGTCAATG AAAACCTTGG TAAATTCCCG
TTGCAAGAAA CGATAAACCA CTACCGTGGA AGCAGTAAGT CAATTAGCTT TACTGAGGAT
GATGTTGATA ATTTGTTAAG CCATCAATAT GGCAAAGCAA AAACCTATTG TACGTTAACT
TTGTTGTACC CAAGCCTAAA TTACAATTTT AAGTATCATC AAGATCATGT TCATCCCCAG
TCTTTCTTTA AGAAAAACCA ACTGAAGACT AACGGGCTTT CAGATGAGCA AATCGAACAG
TTTTTGGCAA CCTTTAACTG CTTACCAAAT TTGCAGTTAT TAGAAGCGAC TCAAAATATT
GAGAAGAGTG ACAAATCGTT TGATGAGTGG TTGAATCTTG TTCACCCGAC ACAGCCTGCA
AGAGAAAGCT TTTTGCGGCA ACATCATATA ATTAGTGACA CCTCACTGGC ATTTGAAGAC
TACCTTAGTT TTTATGAGCA ACGTCGTAAT GTTTTAAAAC TGAAGCTTAT TAATTTGCTA
AATGTTTCAG TAAGTTCTTC TGCTAATGTT GAGCTGGTGT GA
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| Protein sequence | MAYQTPITIR SAIENIKKRR YLLPSIQREF VWDTDQIETL FDSLMRDYPI STFLFWKVDK
NKVKDFQFYE FLNNYHEKDN RHNRKAEPAD DEDIIALLDG QQRMTSMFIA LTGTYSKKMP
YYQWNSPHAF PAKKLYLNLL KPSDGLEVEY DFKFLTEEDA TQTHGHYWFE CGKILELTDM
GKVSMFMMKN KLMDTSFYTE KESEFAINTL SEFFKVIHDK GTISYYLEKS EELDKVLQIF
IRINSGGTKL SYSDLLLSIA TAQWKDKDAR EVIHEFVDDI NQIGDGFNFN KDIVLKSCLV
LSDFDVKFKV DNFTKENMAQ IELNWDKISA AVCSSIQLVS KLGFSRENLA ATNTIIPIAY
FIYRNGFENS ILHSVQRFED RIAVKDWLAR VLLKGTFGGQ PDSIYPKMRD LVNENLGKFP
LQETINHYRG SSKSISFTED DVDNLLSHQY GKAKTYCTLT LLYPSLNYNF KYHQDHVHPQ
SFFKKNQLKT NGLSDEQIEQ FLATFNCLPN LQLLEATQNI EKSDKSFDEW LNLVHPTQPA
RESFLRQHHI ISDTSLAFED YLSFYEQRRN VLKLKLINLL NVSVSSSANV ELV
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