| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2159 |
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| Symbol | |
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| ID | 5609663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2612336 |
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| End bp | 2612977 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640933063 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473896 |
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| Protein GI | 157375296 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAACG ACACCCAATT TACCCTGCTG CGCCATGGAC TCCCAGAGCA ATCAGGTTGC
CTCCTCGGCC GTACCAACCC GCCGCTGACG GCTAAAGGCT GGCAGCAGAT GGATCAGAGC
AGTGACTCAC TGGCATTCGA CATCATCATC AGCTCGCCGC TTGTCAGGTG TCAGGCATAC
GCCCAGAACC TGGCCCAAAA ACATAACAGC AGCCTTTTCA TCGATGCGGC CTGGCAAGAG
CTCGATTTCG GTCATTGGGA TGGCGACAGC ATCGCCAGGC TATGGGAAGA CCCGGAGCAA
GCTTACGGCC AATATTGGCA CGCCCCCTTT AAACACACGC CACCAAACGG CGAGTCAACT
TCAGATCTAT TGAAACGACT GACGACGAGT ATCGATGAGC TAAGCCGTAA GTACAGAGGC
CAGCGTCTGT TAATCGTCTG TCATTCAGGA GTGATGCGGA TGGTCCTGGC ATGGCTTCTG
TGTAGCACTC AAGAGAGCAA CCCACATCTG AGTCGGGTTC AGCTCGAGCA TGCGGCGCTG
TTGCATTTCA ACACCTATAT CGATGAAGAA GACACCCTGT GGCCGCAGCT TCAAGGCTTA
ATCAATCCGA GCGTATCTCT TAACTCTTTG ATGGATAACT AA
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| Protein sequence | MKNDTQFTLL RHGLPEQSGC LLGRTNPPLT AKGWQQMDQS SDSLAFDIII SSPLVRCQAY
AQNLAQKHNS SLFIDAAWQE LDFGHWDGDS IARLWEDPEQ AYGQYWHAPF KHTPPNGEST
SDLLKRLTTS IDELSRKYRG QRLLIVCHSG VMRMVLAWLL CSTQESNPHL SRVQLEHAAL
LHFNTYIDEE DTLWPQLQGL INPSVSLNSL MDN
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