| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1960 |
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| Symbol | |
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| ID | 5610600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2368129 |
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| End bp | 2368671 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932844 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001473697 |
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| Protein GI | 157375097 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.831698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.993391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGA GAAAGATGTC CAATCGAGAA GTCTTCGCCT CAATAATCGG CGCATTCTTC
GCGACATTAT GCGCCTCTTT TTTCAGTAAC AGCATTCTCG AGGCTGATAA TATGCCAATG
GTATTAGCGT CGACCGGAGC CTCGGCCATG CTAATCTTTG GGATCCCTCA TAGTCCGGTA
TCTCAGCCCT GGCCGCTGGT CGGCGGGCAC ATCATCTCCG CTCTTATCGG CATTTCTGCC
TACTATCTGA TCCCCAACCC GGTATTAGCC TCATCAGTTG CCATCGGCAT CGCCATGTTA
GCCATGCACT GCACCGGATC TATGCACCCT CCCGGTGGCG CCACAGCGGT TACAGCCGTT
ATTGGTGGCA GCACAGTACA TGAACTTGGC TACTACTTTG TCATCGTACC GGTATTTTTT
AACTCGATAA TATTGCTTTC GATAGCGATG GCCATCGGCA CTTTCAGAGA GAAAAACCCC
TTTGTCACCG AGGGGACGGA ACAGGAAGCT TGGTTAATAC AGCCGATGAA TGGTGAGTCT
TAA
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| Protein sequence | MPMRKMSNRE VFASIIGAFF ATLCASFFSN SILEADNMPM VLASTGASAM LIFGIPHSPV
SQPWPLVGGH IISALIGISA YYLIPNPVLA SSVAIGIAML AMHCTGSMHP PGGATAVTAV
IGGSTVHELG YYFVIVPVFF NSIILLSIAM AIGTFREKNP FVTEGTEQEA WLIQPMNGES
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