| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1806 |
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| Symbol | |
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| ID | 5612716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2176512 |
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| End bp | 2177087 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932681 |
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| Product | elongation factor P |
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| Protein accession | YP_001473545 |
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| Protein GI | 157374945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P
[TIGR02178] elongation factor P-like protein YeiP |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.97867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAAGG CTAGTGAAGT AAAAAAGAAT ACCGCAATCG AGTTTAACAA TAATGTTTAT
CTCATCAGAG ATATTGAACG TTCCGTGCCA CAAGGTCGCT CCGGCGGCAG CTTATATCGT
ATGCGTATGT ACGATGTGGC AACCGGGTCG AAACTCGATC ATACTTTCAA AGCCGATGAG
ATGATCAATC TGGCAGACCT AAGCCGCCAC GAAGTGAGCT TCTCCTATAT TGATGGCGAT
GAATATGTTT TCATGGATAT CGCTGACTAT ACTCCCTACC ACTTCAATAA GGACTCGATT
GCAGACGAGA TCCTCTTTAT TAATGAAGAG ACTCAAGGGC TGCAAGTACT TACCGTCGAT
GGGACACCTG TGGCTATCGA GCTTCCCGCT AACGTCGAGC TGGTCATTGT AGAGACAGAT
CCTTCCATTA AGGGCGCCTC TGCCAGTGCG CGCACTAAGC CTGCCATCCT CTCTACCGGT
CTTTCGGTAC AAGTTCCTGA ATATATTGCA AACGGTGAGA AGATTAAGAT CAATACGGCC
GAGCATAAAT TTATGAGCCG TGCAGATTCT AAATAA
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| Protein sequence | MPKASEVKKN TAIEFNNNVY LIRDIERSVP QGRSGGSLYR MRMYDVATGS KLDHTFKADE
MINLADLSRH EVSFSYIDGD EYVFMDIADY TPYHFNKDSI ADEILFINEE TQGLQVLTVD
GTPVAIELPA NVELVIVETD PSIKGASASA RTKPAILSTG LSVQVPEYIA NGEKIKINTA
EHKFMSRADS K
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