| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1777 |
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| Symbol | |
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| ID | 5610700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2136931 |
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| End bp | 2137905 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932647 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001473516 |
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| Protein GI | 157374916 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAA AACCCAATAC CTTAAGAACG CCCGATGATG CTTTTGTCGG ATTGAACGAT
TATCCCTTCG AAGCTAACTA TAGGCAGGTC GATGGCATGC GTCTTCACTA TATCGACGAG
GGCAAAGAAA ATGCCAAGGC GATCTTCCTG CTTCACGGGC AGCCATCATG GAGTTATCTC
TACAGGCATA TGATCCCGCT GCTTGTCGAC GCAGGTTATC GTGTGATTGC GCCTGATCTG
ATTGGTTTTG GTAAGTCGGA TAAACCTATG GATTCAGAGA CCCACACCTA CGCGAATCAA
GTTAAGTGGA TGGGGGACTT TGTCAGGCAG TTAGGCGTAA ATAATGCGAG TGCCTTTATG
CAGGACTGGG GCGGCATGAT TGGCTTAAGA GTATTGGCGC AACAGCCGCA GTGGTTAGAC
CGTTTGGTAT TGGCCAATAC GGCGCTGGCC GAGATGAGTA AGCTGGAAAA GTTTATGGTG
CCTAAGATAT TAAAGCTTCT TGCTGTTATG GCAGGCAAGC CGAGCCTGGA AAAATTCATG
GGCAATATCA ATTATGGCAA TTGGGCGGGG TACTTCAGGC ACGCCGAGTC TCTGCAGATC
GGTCAGATCA TCCAGTCACT AACGACCAGA GTGCTAAACG AAGATGAGAT GCGGGCCTAT
GATGCGCCAT TTCCGACGCC GCAATACTAT GCTGCCCCGA GAAAGATGCC TGAAATCGTG
GCATCTGAGC TCGATGAGGT CAATGCCGAC TGGGAAAAAC TTAAGCGATG GAATAAACCT
ATGCTGACCC TGTTTAGCGA TAAAGATCCC TTCTTAGCGG ATCAAGGCTA CGACAAGAAG
TTTCAAAAGA ACTTCAGCGG TGCATTGGGC CAGCCCCATA TGACGGTAGA GAATGCCTCG
CACTTTCTAC AGGAAGATCA ATCCAAGCTG CTGGCAACGC GCTTGAGCTG CTGGTTACAA
CAAACTTCAT ACTAA
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| Protein sequence | MNIKPNTLRT PDDAFVGLND YPFEANYRQV DGMRLHYIDE GKENAKAIFL LHGQPSWSYL
YRHMIPLLVD AGYRVIAPDL IGFGKSDKPM DSETHTYANQ VKWMGDFVRQ LGVNNASAFM
QDWGGMIGLR VLAQQPQWLD RLVLANTALA EMSKLEKFMV PKILKLLAVM AGKPSLEKFM
GNINYGNWAG YFRHAESLQI GQIIQSLTTR VLNEDEMRAY DAPFPTPQYY AAPRKMPEIV
ASELDEVNAD WEKLKRWNKP MLTLFSDKDP FLADQGYDKK FQKNFSGALG QPHMTVENAS
HFLQEDQSKL LATRLSCWLQ QTSY
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