| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1772 |
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| Symbol | |
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| ID | 5612230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2130572 |
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| End bp | 2131054 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932642 |
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| Product | MarR family transcriptional regulator |
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| Protein accession | YP_001473511 |
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| Protein GI | 157374911 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGT ACGACCAACT ATTAATTTCA TTGCGCCGTG TGATCCGAGC TATCAGCATA
CATTCCAGGC AGTTAAATAA AGAGTCTGGA TTAACCGGTC CGCAGTTAAT GGTAATGCGC
AAAATTGGTG AACTTGACGC ACCGCTTGCA AAACAGGTTG CTAAAGAGAT CACTTTAAGC
CCGGCAACCG TTACTACGAT TCTAGATAGA CTCGAAAGCC GTCATTTAGT CATCAGAACA
CGCAGTGAAA CTGATAAACG TAAAGTGCAT TTATCGTTAA GTGAAGCTGG CCAGACGTTA
TTAGTCGACT CGCCAAGACC ACTTCAAGAG CATTTTATTA AACGCTACCA AAACCTTGAA
GAGTGGGAGC AAAGCCAGTT GCTTTCAGCC GTAGAACGTA TTGCATCTAT GATGGATGCC
GACGAGCTCG ATGCTGCACC AGTATTATTG GTAGGACAAA TTCAAGCCGA TGAGACTTTG
TAA
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| Protein sequence | MEKYDQLLIS LRRVIRAISI HSRQLNKESG LTGPQLMVMR KIGELDAPLA KQVAKEITLS
PATVTTILDR LESRHLVIRT RSETDKRKVH LSLSEAGQTL LVDSPRPLQE HFIKRYQNLE
EWEQSQLLSA VERIASMMDA DELDAAPVLL VGQIQADETL
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