Gene Ssed_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1506 
Symbol 
ID5610715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1792680 
End bp1793042 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content44% 
IMG OID640932372 
Producthypothetical protein 
Protein accessionYP_001473245 
Protein GI157374645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA ACCAAGGCCC AAGTAAGTTA GATAAAGTAT TGGCAGAAGC CAGAGAGTAT 
AAAGCGAAAC GAGAAACGGG TTATCGAGAG CAAGCGCTTA AGCTCTACCC CTGGGTCTGC
GGTCGTTGCA CGCGAGAGTT CAATAATGCC AACTTACGTG AGCTCACTGT GCATCACAGA
GATCATAATC ATGATAATAA CCCATCTGAT GGGTCTAACT GGGAGTTATT GTGCCTATAT
TGCCACGATA ATGAACACTC TAAATTTGAA GAGTTGATCC AATACGGCGC GACTAAAGAA
GCTAAGGTCG AAGCGGCAAC CTACAATCCT TTTGCAGACC TCAAAGGCAT GATGAAAAAG
TAA
 
Protein sequence
MSANQGPSKL DKVLAEAREY KAKRETGYRE QALKLYPWVC GRCTREFNNA NLRELTVHHR 
DHNHDNNPSD GSNWELLCLY CHDNEHSKFE ELIQYGATKE AKVEAATYNP FADLKGMMKK