Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1506 |
Symbol | |
ID | 5610715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1792680 |
End bp | 1793042 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640932372 |
Product | hypothetical protein |
Protein accession | YP_001473245 |
Protein GI | 157374645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAA ACCAAGGCCC AAGTAAGTTA GATAAAGTAT TGGCAGAAGC CAGAGAGTAT AAAGCGAAAC GAGAAACGGG TTATCGAGAG CAAGCGCTTA AGCTCTACCC CTGGGTCTGC GGTCGTTGCA CGCGAGAGTT CAATAATGCC AACTTACGTG AGCTCACTGT GCATCACAGA GATCATAATC ATGATAATAA CCCATCTGAT GGGTCTAACT GGGAGTTATT GTGCCTATAT TGCCACGATA ATGAACACTC TAAATTTGAA GAGTTGATCC AATACGGCGC GACTAAAGAA GCTAAGGTCG AAGCGGCAAC CTACAATCCT TTTGCAGACC TCAAAGGCAT GATGAAAAAG TAA
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Protein sequence | MSANQGPSKL DKVLAEAREY KAKRETGYRE QALKLYPWVC GRCTREFNNA NLRELTVHHR DHNHDNNPSD GSNWELLCLY CHDNEHSKFE ELIQYGATKE AKVEAATYNP FADLKGMMKK
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