| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1437 |
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| Symbol | |
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| ID | 5609847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1703214 |
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| End bp | 1704386 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932303 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_001473176 |
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| Protein GI | 157374576 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATCGAA TTTCTGAACT CGCTGTAGAA GTGGGGTTAT CACGTACTGC TCTGCTCTAT
TATGAGAAAC AACAACTTAT AAAAGGTCAA AGGCAGAATA ACGGGTATAG GGTTTACAAC
GATAAAGATC TCCAGCGTAT TCGTTTGATT CAGAAACTTC AGGCTGGAGG GTTAACCCTC
AAAGAGTGCA AAGCGTGCTT GGAAGCAAAA GTAGATCGCA AACTTCTAGA AAGCCGCCTG
TACAAGCTGG ATGAGGAGAT TGCTCAAAAA CAGCAGTCAC GAGAACTTCT TGCGGCGATG
CTTGGCGAGG GCGACCTAAA AGCATGGCAT GAAAGCGTGG ATAAGCTAGC TCCGGATGCG
CACTTAGATT GGTTAATGAA GCAGGGTTTC AGTGAAAAAG AGGCTCTGCG ATTAAAATGG
TTATCAAAAG ACATGAACGA ACACGAACAG TATATGATTG AATTTATGAA GATCTTTGAA
GCACTTGAAC GATGGGCGCC AGGTAGCGAA AGTGAAACTC TGAAAGCGTT ATCGCTTTTG
CCTGAGCAAC CTAAAGCGAT TCTTGAAATT GGTTGCGGTA AAGGGTTGGC CACGACGGTA
CTGGCCAATA AAACAACCGC ATCTATTACA GCGGTTGATA ACGAACAGTC TGCATTGACA
AGACTCAGTA ACCGTTTTGA AGCGGACAGC TTGGCATCTC GACTCACAAC CGTTTGTGCC
AGTATGACGG AACTGCCTTT TAATAATGGG AGTTTCGACC TCTTGTGGGC AGAAGGCAGT
GCTTACATTA TGGGTGTGCC CCACGCGCTA TCACAATGGA AGCCTCTACT TGATGAGGAC
GGAATTTTGA TGATGAGTGA CTTAGTTTGG TTGACTGACA CGCCGAATGA GGAAGCTATC
GAGTTCTGGA AGCATGAATA TCCAGATATT CAAACGGTTA CTACTCGTGT CAAACAGATG
GAAGTTGCTG GTTATGAAGT TCTTAACAGC TTTACGCTCA GTCACCAAGC ATGGCAGAAC
TACTATGAAC CATTGAGATC GCGCATTGAA GAACTACAAC CAGAAATGCA AGGCTCTCAG
GCACTACAAG ACATCTGTAA AGAAGTCGAC ATTTACAGCA ACTACCTCGG TCAGTTTGGC
TATCAGATGT TTATCCTAAG AAAGTGTCGT TAA
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| Protein sequence | MYRISELAVE VGLSRTALLY YEKQQLIKGQ RQNNGYRVYN DKDLQRIRLI QKLQAGGLTL
KECKACLEAK VDRKLLESRL YKLDEEIAQK QQSRELLAAM LGEGDLKAWH ESVDKLAPDA
HLDWLMKQGF SEKEALRLKW LSKDMNEHEQ YMIEFMKIFE ALERWAPGSE SETLKALSLL
PEQPKAILEI GCGKGLATTV LANKTTASIT AVDNEQSALT RLSNRFEADS LASRLTTVCA
SMTELPFNNG SFDLLWAEGS AYIMGVPHAL SQWKPLLDED GILMMSDLVW LTDTPNEEAI
EFWKHEYPDI QTVTTRVKQM EVAGYEVLNS FTLSHQAWQN YYEPLRSRIE ELQPEMQGSQ
ALQDICKEVD IYSNYLGQFG YQMFILRKCR
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