| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1310 |
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| Symbol | |
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| ID | 5611341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1555464 |
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| End bp | 1556195 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640932163 |
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| Product | uncharacterized endonuclease III related protein |
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| Protein accession | YP_001473049 |
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| Protein GI | 157374449 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000484285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGATA ATATGAAGCC TTTTTACGCT ATTTACCAAA CCTTGTATAA CTTATATGGT
CCTCAAGGTT GGTGGCCACA AACAGGATAT GCTGGTAGCA ACCCGACTAA GCGTGGGGCC
ACCAATGGTT ATCACCCAAA AAGGTATGAC TTTCCGCAGA ATATCGACCA AGTTTTTGAA
GTATGTTTAG GGTCAATTTT AACCCAGAAC ACCAATTTTA TTGCAGTTGA AAAAGCACTA
ATAAATTTGG TCAACTTGAA GGCCTTAACG CCAGAAGCGA TATTAGCTTT AGATTATGAT
AATTTTAAGC AAGCGATACG TCCTGCCGGA TATTACAACC AAAAATCGCG TTACATCCGT
GAATTTATCC CATTTTTCCT TAAACTCAAT GGTGGTGTCC CAAGTCGAGA GGGATTGTTA
AGTTGCGTAG GCATTGGGCC AGAAACCGCT GATTCGATTT TGCTTTACGG CTATAAACAG
CCACAATTTA AAGTTGATGC GTATACTACA CGAATCTTTC ACCAGTTGGA GCTTATTCCA
GAAAATGCGA AATATGATGA TATAAAAGTG GCTGTTGAGA CTGAATTATC TAATATAGTG
AAAGGGGAAA AGTTGGTAAT AATTTATCAG GAGTTTCATG CATTGATAGT CGAGCATGCC
AAGCGGTTTT ATAGTAAAAA GCCTTACGCA GAGGAGTGCC CATTGCCCCC AAACAAAAAG
CATTCTTCGT AG
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| Protein sequence | MTDNMKPFYA IYQTLYNLYG PQGWWPQTGY AGSNPTKRGA TNGYHPKRYD FPQNIDQVFE
VCLGSILTQN TNFIAVEKAL INLVNLKALT PEAILALDYD NFKQAIRPAG YYNQKSRYIR
EFIPFFLKLN GGVPSREGLL SCVGIGPETA DSILLYGYKQ PQFKVDAYTT RIFHQLELIP
ENAKYDDIKV AVETELSNIV KGEKLVIIYQ EFHALIVEHA KRFYSKKPYA EECPLPPNKK
HSS
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