| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1244 |
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| Symbol | |
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| ID | 5611569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1475606 |
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| End bp | 1476175 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932097 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001472983 |
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| Protein GI | 157374383 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.327925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.573303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAC TTATGCTCAG TTTTCTATTT ATTGCAGGAG TGACACTTAG TTTTTCGGCA
TTTAGCTGGA GCGATAGCGA TCATGATGGC GTTCCCGATA TGAAGGACGC CTGTCCGGAC
ACTCGCTCAG GTGCTCTGGT CGATGCCGCG GGGTGTGAGA AACAGACCGA ATTTGAAAAT
ATATGCTTAA GCACAACTGC TGGTGAAGTT TATCCTCCCA GTTGTAGTGA ACTCAGTGAG
TTGCCGTTGA ATTTTGAGTT TGCTAAGGCT GAAGTTATGT TTTCTCAGTG GAAAACCTTG
GCGAGATTAA AGCAGTTTCT GCAACGCTTT GATGTGAACC TTTGTCTTCT GGGTTATACA
GACGCTATGG GAAGTTTGGA CTTAAACCAA AAGTTATCGG CTCAGCGAGC CATGGCTGTA
AAGCAAATTT TGGTGGAGGA TTATGGCTTT AGTTCTTCGC GTTTTGTTGT AAAAGGGATG
GGGAGTGAAT CACCTATTGC CAGCAATGAA AAGCCCGAGG GGAGGGCCTC AAATCGACGA
GTCGAGTTTG TCGTAGATTT GAACAGGTAG
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| Protein sequence | MKQLMLSFLF IAGVTLSFSA FSWSDSDHDG VPDMKDACPD TRSGALVDAA GCEKQTEFEN
ICLSTTAGEV YPPSCSELSE LPLNFEFAKA EVMFSQWKTL ARLKQFLQRF DVNLCLLGYT
DAMGSLDLNQ KLSAQRAMAV KQILVEDYGF SSSRFVVKGM GSESPIASNE KPEGRASNRR
VEFVVDLNR
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