| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1228 |
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| Symbol | |
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| ID | 5614168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1463240 |
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| End bp | 1463674 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932081 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472967 |
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| Protein GI | 157374367 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000394867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.28109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAGAG TTATTTTGTC AGCACTAATT CTCACTCTCG CCTTCGTCGG CAATGTTTCT
GCAGAGCAGA AGCAGAAGGT AGGTAACTTC GATATTCACT ATGTAGCCTT TAGCAGCACA
TTTCTGACTC CCACTATTGC TAAGTCATAC GGCATTAAAC GCAGTAGTTA TACCGGGATC
ATCAATGTTT CTGTGCTCGA CACCAGCCAG AAAGGAAACC CTCCTGTTGC GATTGAAATT
TCAGGCATTG CTAATAATCT TCTTGATGCG CGTATCAACC TGGAGTTCAG GGAGATCCGT
GAAGCAGATG CTATCTACTA TGTCGCTGAG GTCCCCTACC GTGATGATCA GGAGATCAAC
TTTAAAATCG CAGTCAAATA TCAGAATAAA CTCAATACAC AGTTGAAGTT CAAACAGAAG
TTCTATGTAG AGTAG
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| Protein sequence | MFRVILSALI LTLAFVGNVS AEQKQKVGNF DIHYVAFSST FLTPTIAKSY GIKRSSYTGI
INVSVLDTSQ KGNPPVAIEI SGIANNLLDA RINLEFREIR EADAIYYVAE VPYRDDQEIN
FKIAVKYQNK LNTQLKFKQK FYVE
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