| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1222 |
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| Symbol | |
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| ID | 5614136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1455282 |
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| End bp | 1456196 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932075 |
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| Product | glutaminase |
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| Protein accession | YP_001472961 |
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| Protein GI | 157374361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2066] Glutaminase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0064518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.448256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGAAC AGGCCTTGTT AGAGCAGGTG GTCGATAAGG TTCGGCCTCT GCTAGGACAG
GGAAAAGTTG CAAACTATAT TCCGGCTCTT GCGAACGTTA ATCCAAATAA GATCGGAATA
TCTGTTACAA CTATAGATGG AGTTACGATA GGGGCTGGAG ATTACCTCGA GCCCTTCTCG
ATTCAGAGTA TTTCAAAAGT ATTTAGCCTT ACGATGGCTT TAACTTTATA TGAAGAGAAT
GAAATTTGGT CTCGGGTAGG TAAAGAACCA TCGGGTCAGT CGTTTAACTC TCTGGTTCAG
GTGGAGTTAG AACGTGGGCT GCCGAGAAAC CCTTTTATTA ATGCCGGTGC CTTAGTCATT
TCAGATCTCA TACAATCCAG ACTCGGGGCC CCGAAGCACC GAATGCTTGA GAGTATTCGT
CACCTCAGTG GTAACCGGAA GCTTATCTCA GATAAGGGGG TGGCTAATTC CGAATATGAG
CACAGCGCAA GAAATGCGGC GATTGCTTAT CTGATGAAGT CATTCGGTAA TTTCAACAAT
GATGTTGATA CCGTATTACG AAGTTATTTT CATTCATGCG CTATTCGCAT GAGCTGCGCA
GATCTTTCTA AGGCTATGTT ATATCTGGCT AACCGAGGTC AAAGCCTGAC CGGTGAGCAG
TTAATCTCCC CTGTACAAAC GCGTCAAATG AACGCTTTAT TAGCCACTTC CGGTCTGTAT
GATGGCGCTG GCGAGTTTGC CTATCGAGTC GGGATGCCAG GTAAGAGTGG CGTAGGTGGA
GGTATTATTG CCGTTATTCC GGGAGACATG TCTGTATGTG TTTGGTCTCC GGAGTTAGAT
TTAAATGGTA ACTCACTAGC CGGAACCGCA GCGCTTGAAG AGTTTTGTCA ACGTCTCGGG
CGTTCAATCT TCTAG
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| Protein sequence | MPEQALLEQV VDKVRPLLGQ GKVANYIPAL ANVNPNKIGI SVTTIDGVTI GAGDYLEPFS
IQSISKVFSL TMALTLYEEN EIWSRVGKEP SGQSFNSLVQ VELERGLPRN PFINAGALVI
SDLIQSRLGA PKHRMLESIR HLSGNRKLIS DKGVANSEYE HSARNAAIAY LMKSFGNFNN
DVDTVLRSYF HSCAIRMSCA DLSKAMLYLA NRGQSLTGEQ LISPVQTRQM NALLATSGLY
DGAGEFAYRV GMPGKSGVGG GIIAVIPGDM SVCVWSPELD LNGNSLAGTA ALEEFCQRLG
RSIF
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