| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0852 |
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| Symbol | |
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| ID | 5613287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1016452 |
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| End bp | 1016742 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931700 |
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| Product | lipoprotein |
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| Protein accession | YP_001472591 |
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| Protein GI | 157373991 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1359] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTAT TAACTGTTGT TGCCCGTATC GAAGCGAAAC AAGATCGAGT GGAACTCGTG
AGATCTGAGC TGCTGAAACT GATTGAGCCG ACACGTAAGG AGCAAGGCTG TCTGCAGTAC
GATCTGCATC AAGATAACGA ACGCCCTGAA CTCTTTGTGT TTTATGAAGG CTGGGAAAGC
AAGGTACTAT TGCAGACTCA CCTTGCTAGT GGTCATATTG AGGCATACCT GAAAGCCGTT
GAGGGGGCGG TAGCAAGCTT TGTTATCAGC GAGATGACAA AAATTGGCTA A
|
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| Protein sequence | MSVLTVVARI EAKQDRVELV RSELLKLIEP TRKEQGCLQY DLHQDNERPE LFVFYEGWES
KVLLQTHLAS GHIEAYLKAV EGAVASFVIS EMTKIG
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