| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0820 |
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| Symbol | |
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| ID | 5612006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 977261 |
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| End bp | 977722 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931668 |
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| Product | DNA-binding transcriptional regulator AsnC |
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| Protein accession | YP_001472559 |
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| Protein GI | 157373959 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0118429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAT CATTTCAAAG AGATAAGCTC GATAACCAGA TCCTATCGGC GCTGATGCAG
GAAGCCAGGA CACCATTCGC CGAACTGGCA AAACGATTTA ATGTCAGCGC AGGTACAATT
CATGTTCGTG TTGAGAAAAT GAAGCAGGCG GGGATCATTA CCGGGGCGCA AATAACCGTA
AACCCAAAAG CACTTGGTTA TGATGTCTGT TGTTTTATCG GGATCAATTT AAAAAGCGCA
GGCGACTATC CAGCCGCGAT ATCTAAACTC AATGCGCTGG AAGAGGTCGT TGAAGCTTAT
TACACAACCG GTAACTACAG CGTATTTGTG AAGGTAATGT GCCAATCGAT CGATGGGTTA
CAGCATGTGC TAATCAACCG AATTCAGTCT ATCGATGAGA TTCAATCGAC AGAAACCTTA
ATTAGCCTAC AAAACCCCAT CGTCAGGGCT GTAAAACCTT AG
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| Protein sequence | METSFQRDKL DNQILSALMQ EARTPFAELA KRFNVSAGTI HVRVEKMKQA GIITGAQITV
NPKALGYDVC CFIGINLKSA GDYPAAISKL NALEEVVEAY YTTGNYSVFV KVMCQSIDGL
QHVLINRIQS IDEIQSTETL ISLQNPIVRA VKP
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