Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0777 |
Symbol | |
ID | 5611360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 920756 |
End bp | 921595 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931621 |
Product | calcineurin phosphoesterase C-terminal domain-containing protein |
Protein accession | YP_001472516 |
Protein GI | 157373916 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00052744 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000244618 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTAAAAG AGGCTATCTC TTATTCAATC GATGATAATG CGAGTGTGCG AGTCGTACAG ATTACCGACC CACACCTGTT TGCCGATCCT GATGCTCAGC TGCTAGGAGT CAATACGGCG CAAAGTCTAG ATGCGGTACT CAATACGATT AATGCCGTAC ATTATCCTGC CGATTTTATG CTGGCTACCG GGGATATCAG TCAAGACTAT TCCGGCGAAT CCTATCATAA CTTTGTACGA GCTATTGCTC CCCTCGAGTT GCCTTGTCAT TATCTTCCGG GCAATCATGA TGATCCTCGT ATCATGCGTC TTAATATGCA GGGCCCGAAG ATTTTTGGTC AAAGAAGAAT CTTAGCCGGA AATTGGCAGA TCATAATGTT AGATTCTACG GTTCGGGGGA AGCCCGGTGG GCACATGTCT GATAGTGAGA TTGACATTAT TAAGAGCGCC GTCGCCGACC AACCCGATCG CTATACCTTG CTTGTCATGC ATCATAACCC GATATTAGTA AATTGCGCTT GGCTGGATCA GCACTGTATG GATAACGGTA ACGATTTCAT TAAGCAAGTG GCTGAACTAC CACAGGTAAA AGGATTGCTG TGGGGGCATG TACACCAAAA ATTGGACCAA AAACACCCTG GGAAGCATGG CATGGTGCAT TTGATGGCGA CACCATCAAC CTGTATTCAA TTCAAACCGA AATCTTCCTA TTTTGCATTG GATGCCCTTC AACCCGGTTA CCGATTGCTT GAGCTAAAAG CTAACGGTAC TATTTTAACT AATATTTACA GGGTGCCTGG TGACAACTTC TCACCAGATA GAGACGCGAG TGGTTATTAG
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Protein sequence | MLKEAISYSI DDNASVRVVQ ITDPHLFADP DAQLLGVNTA QSLDAVLNTI NAVHYPADFM LATGDISQDY SGESYHNFVR AIAPLELPCH YLPGNHDDPR IMRLNMQGPK IFGQRRILAG NWQIIMLDST VRGKPGGHMS DSEIDIIKSA VADQPDRYTL LVMHHNPILV NCAWLDQHCM DNGNDFIKQV AELPQVKGLL WGHVHQKLDQ KHPGKHGMVH LMATPSTCIQ FKPKSSYFAL DALQPGYRLL ELKANGTILT NIYRVPGDNF SPDRDASGY
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