| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0729 |
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| Symbol | |
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| ID | 5611773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 873453 |
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| End bp | 874010 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640931573 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472468 |
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| Protein GI | 157373868 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3117] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.294859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAGAG TGACTCTGGC CATTATCGCT TTCTTTGGTA CGGCCTTAAT ACTTTATTGG
CAGGTGCAAT CGAAAAGAGG CGAAGAGGAG GTGGCAATAG ATGCCAGCCT TCGACCAGAC
TATGTTGCCG ATAATCTGCG AAGCGTAGAG TATAATGAGT TAGGCCTGGT TAATAGCCGG
GTTACAGCGA CACATATGGA GCATTTTGAA GAGGCCAACA TGACCTACTT CACACAGCCC
ATCTATCTGG TTTATCCCGA TAAGGGACAA GCTCAATGGC GTCTTCAATC GTCTCAGGGA
ACACTGAACA AGAAATCGGG TAAAGTGATT CTGGAGAAGG ATGTTATTAT TGATGCGATT
AGCCCGGAAG AGCCTGTTCA GACAATTAAG ACGACTTACC TTGAATTAGA TCTAAATACT
ATGGTTATGA CATCGGATCG CGATATCTAT ATCACAGGTA GCGATTTTAT GATTAAAGGG
GTTGGACTCT ACGCAGACCT TAATGCTCAG AGTGTGCAAT TAACCAGTCA GGTTGAAGGA
ATATATGAAG CAAAATAA
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| Protein sequence | MNRVTLAIIA FFGTALILYW QVQSKRGEEE VAIDASLRPD YVADNLRSVE YNELGLVNSR
VTATHMEHFE EANMTYFTQP IYLVYPDKGQ AQWRLQSSQG TLNKKSGKVI LEKDVIIDAI
SPEEPVQTIK TTYLELDLNT MVMTSDRDIY ITGSDFMIKG VGLYADLNAQ SVQLTSQVEG
IYEAK
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