| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0703 |
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| Symbol | fumC |
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| ID | 5612206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 847686 |
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| End bp | 849062 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931547 |
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| Product | fumarate hydratase |
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| Protein accession | YP_001472442 |
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| Protein GI | 157373842 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00794329 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACAC GTATTGAAAG AGACAGCATG GGAGAGCTTC ATGTGCCTGT TTCGGCGCTA
TATGGAGCCC AAACACAGCG AGCGGTAAAT AACTTTCCCA TCAGTGGCAA GACTATGCCT
GAGGCATTTA TACGTGCCTT ACTCATGGCT AAGTCGGCCG CGGCTCAGGC TAATGCAAAA
TTAGCACTGT TACCGCAAGA TATGGCTGAC GGTATCTCAG ACGCGGCGAG TCAACTACTT
AACGATCAGA ATATGATGCA GCATTTTCCC GTGGATGTGT TTCAAACCGG TTCGGGTACC
AGCTCGAACA TGAATGCTAA CGAAGTATTG GCCACTTTAG CATCTAAAAT TGTTAACCAA
ACAGTAGGTG CCAATGACCA TGTCAATTAT GGACAGAGCA GCAACGATAT CATCCCATCC
TGTATTCATA TCAGTGCCGC CATCGAGCTT GAAAACCGTC TGTTACCGGC ACTGGAACAT
CTGCTGAAAG TGATCAAGCA AAAAGCCAGC GAAGTCGATC ACCATATCAA GACCGGCCGT
ACCCATCTGA TGGATGCCAT GCCTGTGCGG ATGAGCCAGA GCCTGCTGAG TTGGGCGAGC
CAGATAGAGC AGGATATCGA GCTGATAAAC GGGGTTAAGC CGAGGTTACA GAGCCTGGCG
CAAGGGGGGA CGGCTGTGGG CACAGGGATA AATGCCCATG AGGATTTCGC TGTCGAATTC
AATCACCAGC TTAGTCAGGC TACGGGCCTT ATATTCACTC CTGCCTACAA TTTTTTCAGC
CATATTAGCA CTCAAGATAT TGCCGTTTCA TTATCAGGAC AGCTGAAAAC TACGGCCGTA
TCTATGATGA AGATAGCTAA CGACCTACGT TGGATGAACT CAGGACCTTT AGCCGGATTG
GGCGAGATTG AGCTGCAAGC GCTACAGCCA GGTTCATCTA TCATGCCGGG CAAGGTCAAT
CCTGTGATCC CGGAAGCCGC CACTATGGTT GCCGCGCAAG TCATAGGCAA CGATAGTGCT
ATCACTGTGG GTGGTCAGGC GGGAAATTTT GAACTGAATG TTATGCTGCC CATGATCGCC
GACAACCTGC TCTCAAGCAT CAATTTGTTG GCCAATGTCA GTTACCTACT GGCGGATAAG
GCCATAGCGA CCTTCACTGT CAATGAGCAG CAGCTGAAGA AGGCCTTGGC GCGAAATCCG
ATTTTAGTGA CCGCCTTGAA CCCTATCATT GGCTATGCAA AGGCCGCTGA AATCGCCAAA
AAAGCCTATA AAGAAGGTCG AGCCGTATTA GATGTCGCCG AGGAAGACAC GGACATCTCT
CGTGAGGAGC TTGAGAGGTT ATTGGATCCT GCCAAGCTCA CTCTGGGCGG CTTGTAA
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| Protein sequence | MTTRIERDSM GELHVPVSAL YGAQTQRAVN NFPISGKTMP EAFIRALLMA KSAAAQANAK
LALLPQDMAD GISDAASQLL NDQNMMQHFP VDVFQTGSGT SSNMNANEVL ATLASKIVNQ
TVGANDHVNY GQSSNDIIPS CIHISAAIEL ENRLLPALEH LLKVIKQKAS EVDHHIKTGR
THLMDAMPVR MSQSLLSWAS QIEQDIELIN GVKPRLQSLA QGGTAVGTGI NAHEDFAVEF
NHQLSQATGL IFTPAYNFFS HISTQDIAVS LSGQLKTTAV SMMKIANDLR WMNSGPLAGL
GEIELQALQP GSSIMPGKVN PVIPEAATMV AAQVIGNDSA ITVGGQAGNF ELNVMLPMIA
DNLLSSINLL ANVSYLLADK AIATFTVNEQ QLKKALARNP ILVTALNPII GYAKAAEIAK
KAYKEGRAVL DVAEEDTDIS REELERLLDP AKLTLGGL
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