| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0643 |
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| Symbol | |
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| ID | 5613545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 781024 |
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| End bp | 783369 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640931488 |
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| Product | ATPase |
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| Protein accession | YP_001472383 |
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| Protein GI | 157373783 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGGA ACGTTTCATC CCTTGTACCA GACCAAAGCC TAAACTTCGA CCCTAATGGT
TTAACAGTCG TCTATGGCGA CAATGGCGCA GGCAAGTCTA GCTATGCAAA AATCCTAAAA
AGTGCATGTT TAACACGTGG TGATGTGCCT AATATCCTTA CGAATGTTTT CAAACCATCA
ACGGAAAAAC CACAAGCCAC TCTGAATTTT AGTTCTGCAG GTGGGGAGCC TACCCCTTAT
GTTTGGGAAA AGGATGGTGA AGATAGCCCA GAGTTAAAGT CCATTCGTAT TTTCGATTCT
AAGTCAGCAG TACATTACAT ATCCAAAGAA GATAGCATTG AGTACAAGCC AGCAGAACTT
AAATTACTTG ATGAATTAGT GAGTGTTTGT TTGGAGGTGA AAAGAAGACT TTTAGGTGAA
CAGAAGCATC ATTCTGCACC GCATCCAATA TTTGGATATA ACCCTTCGAC TAAAGTTAAC
GGATTCATTC AGTCACTAAA CAATTTACCG ATTGCAGAAT CAACCAGAAC ATTAGATTTT
CACTGCGCAA CAGATGAAGA AATAGATCAA ATAGAACCCT TGAAGCTAGA AATTGTCGAG
TTAACAGGCA AAACACCTGA ACAATTGAAA AAGGAGTTAG CTGGCAGGTA CGGTCACCGA
GAGCCTTTAT ATAAGTTTAT TATCAATTTA ATCTTCCAAC TTAGTGATGA CAACTTAAGC
AAAATTGGAC GATTGTATGA TGAGAAAATT TCTAAAGTTG CAGCAGCCGA AGCCATAAGA
CAAACAACTC TCACTGGTTT ACCTATTGGT GAAATTGGCA CTGAGGTTTG GAAAGAGATG
TGGAGGCATG TTGAGGGTTT TATAACTAGT CAAAATGGTT CCTTCCCTCC AGTTGCTGGT
GAGAATTGCC CGACTTGTTT ACAGGTTATA GATACTGATA CAGCTGAACG TATGAAGACA
TTCCACAATT ACATACAAGA TCAGTCTCAA GTTGAAGCTC AAAAGGCTAC CCAAGCATAT
CAAGCTCGTA TTCAGTTTAT TGAAAACCTG TCTTTCGATT TATCACACTT TACTGGAATC
CTAACTGAAA TCGAAGCCGT AAAGCCTGAA GTAAAAATCG CATTAGATGT TTTGATGGAG
CAACTAACCA ATCGCAAACA GGCTGTTCTT TCTGCCACTC CATGTTTTAT CCAACCGCCG
TTAATTCTTA ATGTACCTAA CTGGTTGAAA GCGCAGTTGG ACTCTCTCCA AGCTAAGATT
GAAAGCGTAG CCGATGATGG CTCATTAGCT AGATCGCTTG CAGAAAAGAA CTCAAGACTG
TTGGAATTAC AAGATAGACA AACAATACGC CAACAGAAAC AATCCGTCTT AAATGAGATC
AATAGACTTT ACACTTTTCA GAGGTTTCAA AATGCTCTGG GTAGCGTTGT ACTCACGAGA
GTTACTTCGT TTACATCAGT GTTGAGCAAT GCAGGTGGAA TCGGTCAGTT AAAAGGTATG
TTTGAAAGCG AATTATCAGC ACTAGGCTTT AAAGCTTTTC CTGTCGAAAC TAAGACTCGT
GGTTCTGCAG GAGAGCAGAA GTTGAAGTTA GCTATTTCGA ATATAACCTC TACAAAGATC
TCAGATATAG CCAGTGAAGG TGAGCAAAAA TGTATTGCTT TGGCAGGCTT TATGTCCGAG
TTAACAATTG ATAATCGTAA GTCAGCAATT ATCTTTGATG ACCCAGTAAA CTCACTAGAC
CACAAATGGC GCAGGTTGTT TGCAAAACGA ATAGCCGTAG AATCACTGCA CCGTCAGGTA
ATTGTGCTGA CGCACGATTT ACCATTTCTA GTCATGTTGA GAGAAGCAGC AAAAGAGACT
TCGTTTAACT TATTGCATAT TGCCCAAAGA GGCCCATATT CTGGTTTCCC TGTCGGTCGT
TTACCATGGG ATGCAATGTC CACAAAAGAC CGAATAAAGT TCTTACGTCA ACAAGTTGTT
GACGTAAGAA GGTACTGTAA AGATTTTGAG AACTTCATAG AGGAAGACTA TAAAGAGAAA
GCTAGATACG TTTATGGAAA GTTGCGAACT ACGTTAGAAC GACTCATTGA AGAGTGGTTG
ATTGGTGATA TTGTCCAACG GTTCAGTAGA GATGTTAGAG CAACGATGAT CGCTAAGCTG
TTAAAAGTTA GCGAGTCAGA AATTACTTTT ATTACCAGCA TCTATGACAA GTGTTGCGGT
TTCCTTGATG CCCACGATAA TCCAGCTAAT GCTGGTGTAG TACCTATGCC TGACATTGAT
GAATTAAAAC AAGACATCGA AGATTTAGCG GCATTTTTTG AGGAAGTAAA GAATAACAGG
AAGTAG
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| Protein sequence | MVRNVSSLVP DQSLNFDPNG LTVVYGDNGA GKSSYAKILK SACLTRGDVP NILTNVFKPS
TEKPQATLNF SSAGGEPTPY VWEKDGEDSP ELKSIRIFDS KSAVHYISKE DSIEYKPAEL
KLLDELVSVC LEVKRRLLGE QKHHSAPHPI FGYNPSTKVN GFIQSLNNLP IAESTRTLDF
HCATDEEIDQ IEPLKLEIVE LTGKTPEQLK KELAGRYGHR EPLYKFIINL IFQLSDDNLS
KIGRLYDEKI SKVAAAEAIR QTTLTGLPIG EIGTEVWKEM WRHVEGFITS QNGSFPPVAG
ENCPTCLQVI DTDTAERMKT FHNYIQDQSQ VEAQKATQAY QARIQFIENL SFDLSHFTGI
LTEIEAVKPE VKIALDVLME QLTNRKQAVL SATPCFIQPP LILNVPNWLK AQLDSLQAKI
ESVADDGSLA RSLAEKNSRL LELQDRQTIR QQKQSVLNEI NRLYTFQRFQ NALGSVVLTR
VTSFTSVLSN AGGIGQLKGM FESELSALGF KAFPVETKTR GSAGEQKLKL AISNITSTKI
SDIASEGEQK CIALAGFMSE LTIDNRKSAI IFDDPVNSLD HKWRRLFAKR IAVESLHRQV
IVLTHDLPFL VMLREAAKET SFNLLHIAQR GPYSGFPVGR LPWDAMSTKD RIKFLRQQVV
DVRRYCKDFE NFIEEDYKEK ARYVYGKLRT TLERLIEEWL IGDIVQRFSR DVRATMIAKL
LKVSESEITF ITSIYDKCCG FLDAHDNPAN AGVVPMPDID ELKQDIEDLA AFFEEVKNNR
K
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