Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0596 |
Symbol | |
ID | 5610155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 727532 |
End bp | 729097 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640931441 |
Product | sugar (pentulose and hexulose) kinase |
Protein accession | YP_001472336 |
Protein GI | 157373736 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.354732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATG AAAAAGATAA CGGCTACCTA CTGGCTATCG ATAATGGCAC TCAGAGTGTC CGGGCACTTA TCTTCGATCT ACAGGGACAA TTGGTTGCCA AATCTCAGGT GAAGCTCATT CCCTATGTGT CACCTCAGTC TGGTTGGTGT GAGCAAAGTG GCGAGTATTA CTGGGATAAG TTGTGTCAGG CCTGCCAATC ACTCTGGGCT CAAGGGATCG ATAAGACAAG AATCAAAGGG ATGTCTGTGA CCACACAGCG CGGCACTATG TTGCCCTTGG ACTGCGAAGG TAACCCATTG CATGACGCCA TATTATGGCT CGATCAGCGT AAAGCCGAAC CGGAGAAAAA TCTGGGAGGG ATCTGGGACC CGCTGTTTAA GGTGATGGGA CTTAGCGAAA CCATCAATAC GTTTCGCAGC CGGGCACAGC CTAACTGGCT CTATCAGGCC AGGCGAGATC TATGGGATAA AACCTATAAA TTTACCTTCC TGTCGGGCTT TTTTCACCAC AGATTGACCG GCGAGTGGGT CGACTCATCG GGCTCGCAGG TGGGCTACCT TCCATTCGAT TACAGGAAAC ACAGGTGGGC AAAGAAGTGG GATTGGAAGT GGCGAGCGCT GAATGTGAGA GAGGATCAAC TATTGCCCTT GGTCGATCCC GGCGATCGGA TCGGTGAGAT CACGGCTCAG GCGAGTGCAT TGACCGGGAT CCCCGAAGGC TTGCCGGTGA TCGCTGCCGC AGCAGACAAG GCATGTGAGG TCTTAGGCTC CGGCGGTCAA CACTCAGATG TGGGCTGCCT GAGCTTCGGC ACTACTGCAA CCATCAATGT CACCATGAAA CGTTACGTTG AGGCGGTGCG CTTTCTCCCC CCCTATCCGT CGGCCATTGC CGGTTCCTAC TGTAGTGAAG TGATGCTGTA TCGAGGCTTC TGGATGGTGA GCTGGTTTAA GGAGCAGTTT GCTCATATCG AGAAGGCAAA AGCGGATGAG GCGGGGATAG AGGCGGAAGC GCTATTCGAT GAGTTGGTGA ATACCGTACC TCCCGGCTCC ATGGGCTTAA TGCTTCAGCC CTATTGGGGC CCGGGTGTTA AGCAACCCGG CCCTGAAGCG AAAGGCGCCG TGATAGGCTT TGGAGATATT CATACCCGCG CTCACCTGTA TCGGGCGATA TTGGAGGGGC TGGCCTTCGG TCTTAAAGAG GGGCTGGAAG CCATCGAAAA GCGCAGTGGC TGCAAGATAA AAGAGCTTAG GGTATCCGGT GGTGGGGCGC AGAGTGATGC GGCCATGCAG ATCGCCGCCG ATGTATTCGG CTTAACCACG GTCAGGGCTC ACACGGTAGA AACTTCGGGA CTGGGCGCCG CCATCGATGC TGCGGTCGGA CTGGGCTTAC ATCCGGATTT CGACAGCGCA ATTAAGGCCA TGGTGCATCA GGGGAAACGG TTCGAGCCCG ATGCAGAGCA TTATAAGATG TATCAGCGAC TCTATGGCGA GGTCTATCTC AATATCTATA AGAAGCTGCA ACCGCTGTAT TCTAAGATCA GGGATATAAC GGGCTACCCT GAATAG
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Protein sequence | MMNEKDNGYL LAIDNGTQSV RALIFDLQGQ LVAKSQVKLI PYVSPQSGWC EQSGEYYWDK LCQACQSLWA QGIDKTRIKG MSVTTQRGTM LPLDCEGNPL HDAILWLDQR KAEPEKNLGG IWDPLFKVMG LSETINTFRS RAQPNWLYQA RRDLWDKTYK FTFLSGFFHH RLTGEWVDSS GSQVGYLPFD YRKHRWAKKW DWKWRALNVR EDQLLPLVDP GDRIGEITAQ ASALTGIPEG LPVIAAAADK ACEVLGSGGQ HSDVGCLSFG TTATINVTMK RYVEAVRFLP PYPSAIAGSY CSEVMLYRGF WMVSWFKEQF AHIEKAKADE AGIEAEALFD ELVNTVPPGS MGLMLQPYWG PGVKQPGPEA KGAVIGFGDI HTRAHLYRAI LEGLAFGLKE GLEAIEKRSG CKIKELRVSG GGAQSDAAMQ IAADVFGLTT VRAHTVETSG LGAAIDAAVG LGLHPDFDSA IKAMVHQGKR FEPDAEHYKM YQRLYGEVYL NIYKKLQPLY SKIRDITGYP E
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