| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0489 |
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| Symbol | |
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| ID | 5613349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 602567 |
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| End bp | 603799 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931334 |
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| Product | periplasmic copper-binding |
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| Protein accession | YP_001472230 |
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| Protein GI | 157373630 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTTTG CGGCGGCCTA TAGCGTTAGC GACTCCGAGG GGCTTAAGGC ACAGCTGGCT
CAGTCCCGCC CAGGAGACTC AATTTTACTG CGCGCCGGAA TATATTCCGG GCAGTTTGAG
ATCCACCATG GGATCACATT AACGGGCGAG AAGGGTGCTG TCATCGATGC TCAGGGCCTG
GGCAGTGCCA TTACCATATT TGTTTCTGAT GTGACTATTT CTAATCTTGA GATCCAGAAC
TGGGGGGGAG ATCTTTACGA ACGAGACTCC GGTATCTTGA TCCAGGATCT CGCTCATCGA
ACCAAGATCG AATCGAATCG CCTAACTGGT CGCGGTTTCG GTGTTTGTGC CGAAAATTCG
GCGAATATTA CCGTCTCTGA CAATATTATC TCCGGCGATC CCGAGCGTCA TAAATTAGAC
AGAGGCGATG GTATCCATCT AAAGAGGGTT GAGTCACCAG TGATAGAAGG CAATAAGATC
TTCCATGTCA GAGACGGGGT ATATATCGAG GCTGGCAAAC ATAGCCTGAT TTTTGATAAT
CAATTTTCCG AGCAGCAATA CGGTATTCAT TATATGTATT CAAAGCGTGA TGAGGCCTAT
GGCAATGAGG CGGTAGATGT CGATGGCGGC TACGCCCTGA TGAGTTCGGA AAATATCAAT
CTATATCACA ATCGTGTCAG CCGGGCTAAA GAGTTCGGGG TGCTACTCAA CATGACTCAC
AACTCGGTCG TTTCCTCAAA TCGGGTATCG GATGCACATA ACCCTCAAGG AAAAGTAGAG
CTTGGCAATG AAGGTAAAGG GATCTTTGTT TATGGTGCCT TAGATAATGA GATCAGGCAT
AACCTCTTTT CGACCAGTGA TATAGGTATC TATATGGCAA TGGGAGGTGA GGGCAATCTT
GTCTATGGCA ATCAATTTGT GAATAACAGA ACCCAAGTTA AATATGTGGG TGAGCAACTA
TTGGAGTGGA GCCGTGACAG CAGAGGTAAC TACTGGAGTG GGTATATGGG CTGGGACAGT
AACAGGGATG GCATAGCCGA TAATCCCTAT CGACCCAATG ATGGCTTAGA TAAACTTTTT
TGGCTCTATC CTGAGGCTCG CTTCTTAATG AATAGCCCGG TGGTGGCTCT GCTTCGATGG
GTGCAGAGCC AATTTGAATT CGGTGAACCT AATGGCATTG TAGACAGCTT TCCTCTGATC
TCTGCCGATA TGGAGTTATG TGTTTTATGT TGA
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| Protein sequence | MSFAAAYSVS DSEGLKAQLA QSRPGDSILL RAGIYSGQFE IHHGITLTGE KGAVIDAQGL
GSAITIFVSD VTISNLEIQN WGGDLYERDS GILIQDLAHR TKIESNRLTG RGFGVCAENS
ANITVSDNII SGDPERHKLD RGDGIHLKRV ESPVIEGNKI FHVRDGVYIE AGKHSLIFDN
QFSEQQYGIH YMYSKRDEAY GNEAVDVDGG YALMSSENIN LYHNRVSRAK EFGVLLNMTH
NSVVSSNRVS DAHNPQGKVE LGNEGKGIFV YGALDNEIRH NLFSTSDIGI YMAMGGEGNL
VYGNQFVNNR TQVKYVGEQL LEWSRDSRGN YWSGYMGWDS NRDGIADNPY RPNDGLDKLF
WLYPEARFLM NSPVVALLRW VQSQFEFGEP NGIVDSFPLI SADMELCVLC
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