| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0201 |
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| Symbol | |
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| ID | 5612905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 227801 |
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| End bp | 230224 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931027 |
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| Product | glycerol-3-phosphate acyltransferase |
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| Protein accession | YP_001471942 |
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| Protein GI | 157373342 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC AAGACTCTCT TTGGTTTAAA TCATTACGCT GGTTACAGAA CAAGTTGGTA
CACACTATTG TTGTGCCCCA CGAACCCTTC AAAGATCTTA ATTTAGATCC GGATAAACCT
CTCGCTTATG TGATGAAAAC TGAGTCTGTC AGTGATATTG CAGCCTTAAG TGAAATCACC
GCAGATCTAG GTCTTCCTAG CCCCTATCAG CCACTCGAAG TCGGTGGTGA GTCGGCGCCA
AGAGTAGTGT GTCTCGAAGG CGCTAAACCC CTCATGGGGA AAAGAGAGAG CAATCATTTC
TTTCTGAATA GCTTTATGAG TCTGCTGAAG ATCCATAAAG AGCGCCCTGA GCTCGATATT
CAACTTGTGC CAGTCAGTCT TTACTGGGGA AGAACTCCGG GAAAAGAAGA TGACACCATG
AAGGCCGCTG TACTTGAGCG TGAAAACCCC ACCTGGCTTA GAAAGTGTCT GATGATCCTG
TTTTTGGGAC GACATAATTT TGTGCAGTTT TCGAGTGCCG TTTCATTGCG CTATATGGCC
GATGAACATG GAACCGATAA ACGTATAGCC CAGAAACTGG CTCGAGTGGC TCGAGTTCAT
TTTAGTCGAC AGCGTAAAGT GATGACGGGG CCGGTTCTGC CTAAGCGGCA GGCACTGTTC
CATGCGCTCA TTAATTCCGA GACCCTGAAG AAGGCGATTC AAGAGGAAGC GGCGAGCAAG
AAGATCACCG AGGTTGAAGC CAGAGCGAAA GCGATGGAAT ACCTGGATGA GATCGCCGCA
GACTATTCCG ATAGCCTGGT TCGAATTGCC GAGCGCTTTC TGACCTGGTT GTGGAATAAA
CTCTATAAAG GCATCAACAT TAAAGGGGCG GAAGAGGTTC GACGGCTGCA CCATGATGGC
CATGAGATCA TCTATGTGCC GTGTCACCGT AGTCATATGG ATTACCTGTT GCTCTCCTAC
ATCCTCTATT ATCAGGGGAT GGTTCCACCG CATATCGCAG CAGGTATTAA CCTTAATTTC
TGGCCTGCAG GCCCCATGTT CCGCAGAGGT GGCGCCTTTT TTATTCGTCG CAGCTTCAGA
GGAAACAAGC TTTATACCAC CGTGTTCCGT GAATATTTAG ATCAGCTTTT CACTAAAGGC
TATTCTGTTG AGTATTTTAC CGAAGGCGGG CGTTCACGTA CCGGAAGGTT ACTCGCACCT
AAGACCGGCA TGTTGGCTAT GACGCTGAAC AGTGTCCTGC GTGGCATGAA GCGTCCTGTG
ACTCTGGTTC CTGTCTATCT CGGTTATGAT CATGTGATGG AGGTGGCGAC ATACCATAAG
GAATTGAGCG GTAAGAAGAA AAAGAAAGAA TCTGTCTGGC AGGTATTTGG TGCCCTGCGT
AAGCTAGGCA ATTTCGGCCA AGGGTATGTG AATTTCGGTA AGCCCATCAC GTTGCATAGT
TTTCTAAATG AACAGAAACC CGATTGGAAA GAAGAGATTG CCAAAGAGCC AGAGCAGAGA
CCTAAGTGGT TGACGCCTAT GGTGAATACC TTGGCCAATC AGGTTATGAC CAATATTAAC
GATGCTGCGG CAGTCAGCTC CGTCACCTTG ACCAGTTTAG TCTTATTAGC GTCAGAGCAA
AATGCATTAG AGCGGTCTCA GCTGGAGAAG CAGTTAGACC TCTATCTTAA ATTACTTAAG
GATCTACCTT ACACCTCTTA TACCTCAGTG GTAGAGGGGG ATGGTAAGTC TCTGGTTCAG
CAGGGGTTGG AGCTTAAGAA AATTAAGCTT GATAGTGATC CTCTCGGGGA TATTATCTCA
ATCGACGAGA GTATCGCCGT TGCTATGACT TACTATCGTA ACAATATTAT TCATTTGATG
GTCATCCCCT CTCTGGTAGC TAGCTGCCTG ACTCAGCATG AGCATATCTC ACGAGATGAG
ATTATCGATA TCATCAAGGA TTTCTACCCT CTGCTTCAGG CTGAGTTATT TATGGGCGTG
GAAGATACAG ATAAGCTTGT TGGTCAGATT TTGGATCTGT TTATCGCTCA AGGCCTCGTT
ACCGAGGATG ATGGTTTCAG TATTATCGAG ACCGAAGTGA ATCAACTCTT ATTACTCGCG
GGAACGGTCG GTGAAACGTT ACAGCGTTAC GCCATTATCT TCAATCTGTT GGCGGTTTGC
CCCAAGATGG AGCGTTCCGA TCTTGAGCGT GAAAGCCACA AGCTGGCACA GCGATTAGGC
GCGCTGCATG GTATTACAGC CCCTGAGTTT TATGATAAGA AGCTCTATGG AGCACTCAGT
GTCAAGCTCA AGGAGTTAGG TTACCTGTCT GATAACGGTA ATAAAGTCGA TGTCCAAAGG
ATCCGGGAGC GAGCGAATGG ATTGCTCCGT TCGTCTGTCA GGCAGACGAT TGTCGATAGT
GTGACTGCGG AGCATAAAGA TTAA
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| Protein sequence | MSKQDSLWFK SLRWLQNKLV HTIVVPHEPF KDLNLDPDKP LAYVMKTESV SDIAALSEIT
ADLGLPSPYQ PLEVGGESAP RVVCLEGAKP LMGKRESNHF FLNSFMSLLK IHKERPELDI
QLVPVSLYWG RTPGKEDDTM KAAVLERENP TWLRKCLMIL FLGRHNFVQF SSAVSLRYMA
DEHGTDKRIA QKLARVARVH FSRQRKVMTG PVLPKRQALF HALINSETLK KAIQEEAASK
KITEVEARAK AMEYLDEIAA DYSDSLVRIA ERFLTWLWNK LYKGINIKGA EEVRRLHHDG
HEIIYVPCHR SHMDYLLLSY ILYYQGMVPP HIAAGINLNF WPAGPMFRRG GAFFIRRSFR
GNKLYTTVFR EYLDQLFTKG YSVEYFTEGG RSRTGRLLAP KTGMLAMTLN SVLRGMKRPV
TLVPVYLGYD HVMEVATYHK ELSGKKKKKE SVWQVFGALR KLGNFGQGYV NFGKPITLHS
FLNEQKPDWK EEIAKEPEQR PKWLTPMVNT LANQVMTNIN DAAAVSSVTL TSLVLLASEQ
NALERSQLEK QLDLYLKLLK DLPYTSYTSV VEGDGKSLVQ QGLELKKIKL DSDPLGDIIS
IDESIAVAMT YYRNNIIHLM VIPSLVASCL TQHEHISRDE IIDIIKDFYP LLQAELFMGV
EDTDKLVGQI LDLFIAQGLV TEDDGFSIIE TEVNQLLLLA GTVGETLQRY AIIFNLLAVC
PKMERSDLER ESHKLAQRLG ALHGITAPEF YDKKLYGALS VKLKELGYLS DNGNKVDVQR
IRERANGLLR SSVRQTIVDS VTAEHKD
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