| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0116 |
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| Symbol | |
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| ID | 5612453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 129317 |
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| End bp | 130810 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640930942 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471857 |
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| Protein GI | 157373257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.496915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAA ATTTAAAGTC ATTTGGTGTG CGGGCTTTTG CAATACTCAG CTTATTTACC
TCCTTTATCT CTGTATCCGC CCCCTGGGTG GACACTTCTG ATATCTATCT GCGTGCCGAT
ATTCAGGCTC TTGCCGATGA AGGTGTGATC ACGGTTCCCG TTAATACCTA TCCGCTGATG
TGGGCCGGTA TCGGTGCTGA TCTGAGCAAA GTTGAGCCCT CGGTATTGCC CCCTTCGGTG
GCGCAAGCCT TCGCCCGGGT GAACTATTAT TATCGAAATG CGGTCGAGAA TCGTGGCAAT
ACGAGAATAA AAGCGGCGGC GGCGACCGAT GCGGCTCGTT TTCAACATTT TGGCTCCGAT
TATAGCGAGC AGGGTGAGCT GCAAGCGTCA TATGAATATA TGGGGGATCG CTTTGCCTTT
AAGGCCTCGG CTTCAGCTAA CTATGATCCC AGTGATGAAA AAGAGTTCAG ATACGATGAT
TCCTATATGG CGGTTATCTT AGGCAACTGG ATCTTTACCG CCGGCGCCGT AGAGCAGTGG
TGGGGGCCTG GATTCGACTC ATCAATGCAT AGATCAAATA ATGCACGGCC GCTGCCTTCG
GTGATGATTA GCCGTAATAA CGCGGCTGCA TTTGAAACTC CCTGGTTATC CTGGCTTGGG
CCATGGACTC TTACTGCAGG TGTGAGTCGT TTAGAGGAGG AGCGTGCGGT CGCTAATCCG
CTACTGTGGA ACTTCCGTAG TTCACTGCGT CCCTTCAGAC AGTTAGAGGT AGGTTTTTCC
TGGACGACCC AGTTCTGTGG TGAAGGCGAA GAGTGCTCCT GGGAAAGTGC CTTGAAGTCT
ATAACCGGTC AGCGAGATTG TCGCGGTGCG GGCGAGGCGG GCTGTACCAA CTATGGTAAT
CAGATGGCGG GTTACGATAT CCGTTTCAGC GATACCTGGT TCGATATTCC ATTTGGTGTC
TATTATGAGA AAACCTGTGA GGATGCCAAG GGCTCAACTC CCTGGGATAT TGTCGATTGT
GGTCACGCAG CGGGTGTAGA TACTCGCTTT AATTTTGACA ATGCTCAGTA CAAGCTCTTT
TTCGAGTACA CTGATACCAT GGTCGCTTGC GGAGAAGATG ATAACGTCTT CAACTGCATG
TATGAACACT CAATATACAA GAGCGGTTCT CGTTATTATG ATAAGGCGTA TGGCAGCACC
TATGACAGCG ACGCTAAAGT CTATGTGTTG GGCTTGATTG GACAGTTTGC TGATAGTCGC
GGCATCACCT CGCTATTACG TTATGCCCAG TTGAACAAAG ATGGCTCCAG TCCGGCTCAT
GGCTGGGCGC CCCAGCCTGC GAAAGAAGAT CTGTTAATGC TGGAGCTTAG CTATCGTATG
CCTATCTGGA AAGGGATGAT GAGTGTCGGT GGTACAGTGT CTCAATCGGA ATTTGAGGTC
GAAGACAAAC AAACCGATGC GACCCTGTTC GGCACCTACG AGTATCGTTT CTAA
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| Protein sequence | MMENLKSFGV RAFAILSLFT SFISVSAPWV DTSDIYLRAD IQALADEGVI TVPVNTYPLM
WAGIGADLSK VEPSVLPPSV AQAFARVNYY YRNAVENRGN TRIKAAAATD AARFQHFGSD
YSEQGELQAS YEYMGDRFAF KASASANYDP SDEKEFRYDD SYMAVILGNW IFTAGAVEQW
WGPGFDSSMH RSNNARPLPS VMISRNNAAA FETPWLSWLG PWTLTAGVSR LEEERAVANP
LLWNFRSSLR PFRQLEVGFS WTTQFCGEGE ECSWESALKS ITGQRDCRGA GEAGCTNYGN
QMAGYDIRFS DTWFDIPFGV YYEKTCEDAK GSTPWDIVDC GHAAGVDTRF NFDNAQYKLF
FEYTDTMVAC GEDDNVFNCM YEHSIYKSGS RYYDKAYGST YDSDAKVYVL GLIGQFADSR
GITSLLRYAQ LNKDGSSPAH GWAPQPAKED LLMLELSYRM PIWKGMMSVG GTVSQSEFEV
EDKQTDATLF GTYEYRF
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