| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8829 |
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| Symbol | |
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| ID | 8672167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | - |
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| Start bp | 9744306 |
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| End bp | 9748232 |
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| Gene Length | 3927 bp |
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| Protein Length | 1308 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | drug exporter of the RND superfamily-like protein |
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| Protein accession | YP_003344205 |
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| Protein GI | 271970009 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00314237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000466085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCGAGT CGTTCGGGCG GACCGTCTAC CGGGCACGCT GGAGCGTGCT GGCGCTGGGG
GCGGTGTTCG CGGTCGTCGC CGGATACTTC GGGCTGGGGC TGTTCGGGCG GATGACCGAC
GGCGGGTTCG ACGACCCGGG CGCCGAGTCG ACCTCGGCCG CCCAGTGGAG CCGGCAGTGG
TTCGGCGGCA GCTCGCCCGA CGTGGTGGTC CTCTACACCC ACCCGACGTT CGAGGCGAAT
GACGAGCAGT TCAGGAAGGA CGTGCACGCC GCGCTCCGCG ACCTGCCCGC CGAGCACGTC
ACGGGGACGT CCACCTACTG GACGACCAAG GCCGCGGAGC TCGTCTCCGA GGACAGGCAC
TCCACCTACG CGCTGATCAC CCTGCGCGGC GGGCAGCTGA CGAAGCAGAG CGGCTACGAG
CAGGTCAAGG ACCGGCTCAG GACCGCGCCG GCCGGATACA CGGTCAAGGT CGGCGGCCCG
ATCCCGCTGC TCAAGGACCT CAACACGCAG ACCGGCGCCG ACCTGCAGCA GGCCGAGGCC
CTGTCGATGC CGGTGCTGCT CGTCCTGCTC GTGCTGGTCT TCGGCAGCCT GGTCGCCGCC
GGGCTGCCGC TGGTCGTCGG GCTGCTGTCG GTGGTCGGCG CGCTCCTGCT GCTCCGGTTG
CTGACCGAGG TGACCGACGT CTCGGTCTTC TCGCTGAACG TCGTGACGAT GCTCGGCCTG
GGCCTGGCCA TCGACTACTC GCTGTTCGTG CTGAACGCCT TCCGAGAGGA GATCCGCCGG
GGCTCGCCGG TGGAGACGGC CGTCGTGCGG ACCATGGCGA CGGCCGGCCG CACGGTCGCG
TTCTCCGGGC TGACCGTGGC GACCTCGCTC AGCGGCCTGC TGCTGTTCCC GCAGATGTTC
CTGCGCTCGA TCGGCCTGGG CGCGGCGGCG GTGGTGCTGG TCGCGATGGC GGCCGCGCTG
ATCGTGCTGC CCGCGCTGCT GGCCGTGCTC GGGCCCCGGG TGGACGCGAT CCGGCTCGCG
CCGGACTTCG GCAGGCACAA GGGCGGCAGC GGGACCTGGC ACGCCATCGC CTCCAGCGTG
ATGCGCCGCC CGGTGGTCTA CCTCGCCGGG GTCGGCGTGG TGCTGTTCGC GCTGGCCGCG
CCGTTCGTGC ACGTGCGGTT CGGCAGCGTG GACCACCGGG TGCTGCCCGA GCGGTTCGAG
AGCCGCCAGG TCGCCGAGGA GATCAACACG GGGTTCGCCA GGAACGCGAT GTCGCCGATC
GATGTCATCG TGCTCGTCGA GCGCGACCTC GTCGGGCCGA TGACCGCGTC GGCGCCCGGC
GCGCTCACCT CGGAGGTCGG GACGCGGCTC GGGCCCATCG GGGTCGGCAA CTCGGGGATC
ACCCCGGTCA CCGAGGTCGG CCCGCTGGAC GTGAAGGCCT TCGTGGAGCG CCTGGAGGCA
CTCGACCACG TCACCGGGGT GGACGTCACC GGGATCTCGC AGAACAACGG TGCGGTACGG
CTGGCGGTCC GCTACGACAA GGACCCGATG TCGGACGAGG CCCGCGCGCT GGTCGAGCGG
ATCCGCGACC TTTCCCTGGA GCGGAACTTC CAGGACGTGG TCGTCGGCGG CCCCACCGCC
GCCCAGCTCG ACCTGCAGGC CAGCCTGGAG TCCACCCTGC CGTGGACCGC GCTGGTGGTC
TGCCTGATGA CGGGCCTGCT GCTGTTCGCC GCGTTCGGCT CGATCCTGCT GCCGATCAAG
GCGATCCTGA TGAACGTCCT CTCCCTGGGC GCGTCCTTCG GCGTGATCGT CTGGGCCTTC
CAGGACGGCA ACCTGGCGGA CGTCCTCGGC TTCACCCCGA CCGGGAGCAT CGAGGCGACC
ATCACCGTGC TGATCCTGGC GGTGGTGTTC GGCCTGTCGA TGGACTACGA GCTGTTCCTG
CTCAGCCGGG TCCGCGCCGA GTGGCTGAGA ACCCGGGACA ACACCGCCGC CGTGGCGGTC
GGCCTGGAGC GGACCGGCGG GGTCATCACC AGCGCCGCCC TGCTGCTGCT CGTGGTCATC
GCGGCGTTCT CCACCGCGGG GATCACCATC GTGAAGATGC TCGGCGTCGG CATGTTCGTG
GCCATCGTGG TGGACGCGAC GCTGGTCCGG GCGCTGCTGG TGCCCGCGAC GATGCGCCTG
ATGGGCGACG CCAACTGGTG GCTGCCGGGC TTCCTGCGGG GGTTCCACCG GCGCATCGAG
ATCCGCGAGC ACGACGTCCG CGACCACCGC CCCGCCGAGA TCGCCCCCAC CTACGTCACC
GTGGAGCGCG AGGACGCCCC CGGCCGCCGC CGCACCACCC CGGCGCACCG CCTGGAGACC
TCCCCGCCGG TGCCGCAGCT CGCCGCCCCC GGACCTCCGC CCCTCGCACC GGCCGTCTCG
GCGCGTGTCA TCAGGTCCAC CCGCGACGGC TCCGACTGGC AGTGGGTCGA GGAGACCGTC
CCCGACCCCG CCCCTCCCGC CCGCTCCGCG CCGCCTCCCG CACGCCCCGT CCCGCCTCGC
GCGGACCCGG CCCCACCCCG CGCGACCCCC ACCCCGCCTC CCTCCCGCCC GGCGCCCGGC
GCGACCCCCA CCCCGCCTCC CTCCCGCCCG GCGCCCGGCG CGACCCCCAC CCCGCCTCCC
TCCCGCCCGG CGCCCGGCGC GACCCCCACC TCGCCTTCCT CCCGCCCGGC GCCCGGCGCG
ACTCCCGTCC CACCTCCCTC CCACCACTCC CCTCCCCCTT CCCGCTCCGC CCCTCCCCGC
GTGGACCCGG CTCCCCGTGT GGACCCGGCT CCATCTCGGA CCGTCCCGCC GTCACCCGCT
CCGGCGCCGG CTCCGCGTCC CCCGCGTCCT TCCCGGCCGG AACCCCGGCC CGCGCCGTCA
CGGGCGTCGG ACTCCCGGCA TCAGCAGCAC CGGTCGAACC CTTACCCCCT TCCGGGGCTC
GACCCCGAGC AGCCGCCACC CGTTCCGGCA CCGCCCGCCG GGCCGTCGGA GCGCGAGCCC
GCACGGGCAC GCAAGGTCAA GAAGGTCATC AAGCCCAACC TGGACGGTCC GGGCTGGCAC
TGGGCCGAGG AACATGAAGA CCCGTCCCCG CCTCAGCCCC TGCTGACCGT CGAGGACGCG
GTGGGACCCG CCCGGCACTC CCCGGCGCGC CCCCCGGTCC CCGGCCGTCC CGTCCCCTCG
CCCGCCCCGC CTCCGCGGGC CCGCCCGGAG CCCTCTCCCC CCGTCATCCG GGTACGGCTG
GAGCCCGATC CCCGTCCGCG CCCCGAGCCT CCCCCCGTCA TCCGGGTACG GCCCGAGCCC
GCTTCTCCGC TCCGCCCCGA GCCGACTTCT CCGCTCCGCC CCGAGCCGGC TTCTCCACCT
CGCCCCGAGC AGCTGCCGCC CGCGCCCCGG GTACGGCCCG AGCTTCCCGC TCCACCGTCC
GCGCCCCGGG TGCGGCCGGA GTTGCCGCCT CCCGCCCCGG CCGCCGCGAC GCCGGGTCCC
ACGCCGGGTC CCACGCCGGG TCCCACGGCG GAGACCGGGG ACGCCCGCCG CACATGGAGC
GCGCCGCCGG TCAGCAGCCA TCTGATCGAC CAGTTGGAGC CGCTCATCCG GCACGACAAC
AGGCCGGTCC CGCCGATCGC GGAACCGCCG GCACCCCGCC CGGAGCCACG CCCGGAGCCG
CGTCCAGAGT CCCCTCCGGA GTCGCGCTCG GCGCCCTGCC CGGCGCCCCG CCCGGAGCCA
CGCCCGGAGT CCCGTCCGGA GACGGAGGAC GGGACACGGG CGGGTGCGTC CGGCCAGGTC
GCGCGGGAGC GGCGGGCCGT ACAGGAGCGA GCGGGACAGG AGGGGCAGGG AGCCGGCGGC
TGGGTCGCGG TGGGGACCCG CACCACGCGG GTCGTACGGC CCAGACAGGA CGGATCCGGC
TGGGAGTGGA CGGAGGTGCC GGAGTGA
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| Protein sequence | MFESFGRTVY RARWSVLALG AVFAVVAGYF GLGLFGRMTD GGFDDPGAES TSAAQWSRQW
FGGSSPDVVV LYTHPTFEAN DEQFRKDVHA ALRDLPAEHV TGTSTYWTTK AAELVSEDRH
STYALITLRG GQLTKQSGYE QVKDRLRTAP AGYTVKVGGP IPLLKDLNTQ TGADLQQAEA
LSMPVLLVLL VLVFGSLVAA GLPLVVGLLS VVGALLLLRL LTEVTDVSVF SLNVVTMLGL
GLAIDYSLFV LNAFREEIRR GSPVETAVVR TMATAGRTVA FSGLTVATSL SGLLLFPQMF
LRSIGLGAAA VVLVAMAAAL IVLPALLAVL GPRVDAIRLA PDFGRHKGGS GTWHAIASSV
MRRPVVYLAG VGVVLFALAA PFVHVRFGSV DHRVLPERFE SRQVAEEINT GFARNAMSPI
DVIVLVERDL VGPMTASAPG ALTSEVGTRL GPIGVGNSGI TPVTEVGPLD VKAFVERLEA
LDHVTGVDVT GISQNNGAVR LAVRYDKDPM SDEARALVER IRDLSLERNF QDVVVGGPTA
AQLDLQASLE STLPWTALVV CLMTGLLLFA AFGSILLPIK AILMNVLSLG ASFGVIVWAF
QDGNLADVLG FTPTGSIEAT ITVLILAVVF GLSMDYELFL LSRVRAEWLR TRDNTAAVAV
GLERTGGVIT SAALLLLVVI AAFSTAGITI VKMLGVGMFV AIVVDATLVR ALLVPATMRL
MGDANWWLPG FLRGFHRRIE IREHDVRDHR PAEIAPTYVT VEREDAPGRR RTTPAHRLET
SPPVPQLAAP GPPPLAPAVS ARVIRSTRDG SDWQWVEETV PDPAPPARSA PPPARPVPPR
ADPAPPRATP TPPPSRPAPG ATPTPPPSRP APGATPTPPP SRPAPGATPT SPSSRPAPGA
TPVPPPSHHS PPPSRSAPPR VDPAPRVDPA PSRTVPPSPA PAPAPRPPRP SRPEPRPAPS
RASDSRHQQH RSNPYPLPGL DPEQPPPVPA PPAGPSEREP ARARKVKKVI KPNLDGPGWH
WAEEHEDPSP PQPLLTVEDA VGPARHSPAR PPVPGRPVPS PAPPPRARPE PSPPVIRVRL
EPDPRPRPEP PPVIRVRPEP ASPLRPEPTS PLRPEPASPP RPEQLPPAPR VRPELPAPPS
APRVRPELPP PAPAAATPGP TPGPTPGPTA ETGDARRTWS APPVSSHLID QLEPLIRHDN
RPVPPIAEPP APRPEPRPEP RPESPPESRS APCPAPRPEP RPESRPETED GTRAGASGQV
ARERRAVQER AGQEGQGAGG WVAVGTRTTR VVRPRQDGSG WEWTEVPE
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