Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8679 |
Symbol | |
ID | 8672017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9567428 |
End bp | 9569878 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003344064 |
Protein GI | 271969868 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCACCC AGGCCAAAGA GATATTCGAG GCGCAGAGCA AGAGCCTCCG TGAGTTGCTG TCGGACAATG GTCTCGGCCT GTACCTTCCG CCGTATCAGC GACCGTATGG CTGGGGTAAG GACAAAGTCG AGAAGCTGCT CGACGATACC CTTCACGGTC TGAAGAATCT CGGCGAGGCT TCCGACAGCT TCACCTTCCT AGGCACCGTA ATCACCATCC ATGACGTCAA CCACGTTACG GTGCAGCCGA TTCTGAAGCC CGAAGTGCCT TCCAAGGTGC TCACCGTGAT CGACGGGCAG CAACGTCTGT CGAGCCTGCT CCTTCTGCTC GTGAGCCTTC ACAATCTGAT CCGCCAGCAC TCGTGGAAGG TCTTCAAGGG CAAGACACCG GATTCCACGG ACCCTGCCGG TGTCGCGCTC TACTCAGAAA CCGTTAGCAT CCTGCAGACC CTCAGTACTG CTTTCTATGA ACGAAAGAAC TTCGGCGATG CGCCGATCTA CCCCCGCTTG ATCCGTGCCT TCGCTGACCA GTGGTCCAAG GATGCAAAGC TCAAACTATA TGAGTCTCCA ATTGCGAACC TAATCTACAT CTACTCGGTG AAGGCAGACG CGGAGCCCCC GACCGTGAAG CCGACCGACT TCAGGCCGAA GGCGCGTTCC GGTGCAGGTG AAAGCGAGAG CGATCTAATC AAGCGGTTCA GCGAGATCCG TGCCGCGCTA ACCAAGCTCG CTCAGCGCAA ACCGATTGAG GAGCTTGAGG GTTTGCCACC GCTCTCGATC TTGGCCACTC AGATCGAGTT TCAGCGTGCG CTGTTCAACC ATGAGCTCGA CCCCAAGCTG TGCACGTGGC TATGCGAGCT GGAGGACGAG CCCGAGGCCG TCTTGATGCG GCTCGTGTTG TTCGCCGCCT ATGCCCTGAA CCGCATTGCG CTGACTGTAG TGCAGGGCAA GGACGAGGAC TATGCCTTTA CCATCTTCGA GTCACTGAAC ACAACCGGTG AGCCCTTAAC TGCCTTCGAG ACGTTCTTGC CGCGCGTTGT GATGGCGGAA AGAGTTCAGG ACTACCGGGG CTCTAGCGCG CACGAGCGCA TGAAGGCTGT TCAGAGCTAC CTCGACCGAT TTGACGTGGG AGAGAAGCTG CAGAATGCGA CCCGCGAGCT GCTAGTGACG TTCGCCCTCG CGGAGACGGC CAAGAAGCTC TCGAAGCGGC TACCTGACCA ACGCGTCTAC ATGAAGGACA CCTTCGACCG TCATAGGGAA TCCGACGACG ATCGCGCTGC GTACTTGCGT CACCTGAGCG ACACAGCGAC TTTCGTTGGC ACGACGTGGG AGCCAGCGAA GGACGCTACC CGTCAGCTCG TCGGACTCCC CACCTCCGCC ATGACGGACA CGGTCAAGCT CTGCCTAGCG TTCCTAAAAG ACCTCAACCA CACGATCGCC ATTGCACCCC TGCTGCGCTT CTACTCCGAA GCTGTTCATG CAGAAGAGGG TGAGGAGCGG GACAGACGAG TCGCGGAGTT TGAAACGGCA ATCAAGGCAA TCACCGCCTT CACAGTCCTC TGGCGAGCAA CCCGACGTGG CACCGGGAAC ATCGACAGCC AGTATCGGGC CATCATGGCG GGTGACTCCT CGCTGACTGG CATGGGCCCC CTCGCGCGTC AGCGGGCGGT GCCAGACCAA GACGAGCCTG AGCCGATGGT GGACGCCGAA GCCCTGAAGA AGGAGCTCGC GGCGCGCTTG TCCAGCACCG ACAAGAAGTA CGGCGGCATC CCGAACCTTG CGTCGTTTCT GGCGGCGGCA ACAGCGTTGC CTCTCTACAC GATCAGCCGG CCGCTGACGC GCTTCCTTCT GCTGGCGGCT TACCACGACA CCATTGAAGA CCCCGACCAT CCCGGCCTGA TAAAGCAGGG AAAGGTGGGT GTGGCTCCGT GCTTCACGTC AGACGGCTGG TTCGATGAAA CGCATTTCAC AATCGAGCAC ATCGCTCCGC AGCAAGAGAC TGGTGGATGG CACAAGGGCT TCTACAGCGA AAAGGAGATC GTTCACAAGA TCGGCAATTT GGTCCTTGCG CCGGGGGCTG CTAACGCGTC ACTAAGTTCG CGGCCGTGGA CTGAGAAGAA GGTGCTGTAT GCCGCACTTG GTGCTACGAC TACCGGGGAG GCCGAGATCA TCCTCAATGA GTCGGGCTTG ACGTTCGCGC AGTCGACCCA GGAACTGGCC CAGATGTCTC ATTACCTGCC GCATCTGCGA GCGCTCGGGC AGCGCGATGC GGAGTGGGAC CCGGCTTTCA TGGATCAGCG AGCCGCTGTT CTCCTTCGAC TCGCCTACGC GCGGCTGAAG GACTGGCTCG GCATCGCGTG GTCAGAATCG ACGACTGATC CAGTGGTCCG CCATGTCGAT GATGAGGTTG AACTCGACGA AGATGAGGAC TCCGCGGAAA ACACCGTCTG A
|
Protein sequence | MPTQAKEIFE AQSKSLRELL SDNGLGLYLP PYQRPYGWGK DKVEKLLDDT LHGLKNLGEA SDSFTFLGTV ITIHDVNHVT VQPILKPEVP SKVLTVIDGQ QRLSSLLLLL VSLHNLIRQH SWKVFKGKTP DSTDPAGVAL YSETVSILQT LSTAFYERKN FGDAPIYPRL IRAFADQWSK DAKLKLYESP IANLIYIYSV KADAEPPTVK PTDFRPKARS GAGESESDLI KRFSEIRAAL TKLAQRKPIE ELEGLPPLSI LATQIEFQRA LFNHELDPKL CTWLCELEDE PEAVLMRLVL FAAYALNRIA LTVVQGKDED YAFTIFESLN TTGEPLTAFE TFLPRVVMAE RVQDYRGSSA HERMKAVQSY LDRFDVGEKL QNATRELLVT FALAETAKKL SKRLPDQRVY MKDTFDRHRE SDDDRAAYLR HLSDTATFVG TTWEPAKDAT RQLVGLPTSA MTDTVKLCLA FLKDLNHTIA IAPLLRFYSE AVHAEEGEER DRRVAEFETA IKAITAFTVL WRATRRGTGN IDSQYRAIMA GDSSLTGMGP LARQRAVPDQ DEPEPMVDAE ALKKELAARL SSTDKKYGGI PNLASFLAAA TALPLYTISR PLTRFLLLAA YHDTIEDPDH PGLIKQGKVG VAPCFTSDGW FDETHFTIEH IAPQQETGGW HKGFYSEKEI VHKIGNLVLA PGAANASLSS RPWTEKKVLY AALGATTTGE AEIILNESGL TFAQSTQELA QMSHYLPHLR ALGQRDAEWD PAFMDQRAAV LLRLAYARLK DWLGIAWSES TTDPVVRHVD DEVELDEDED SAENTV
|
| |