Gene Sros_8679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8679 
Symbol 
ID8672017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9567428 
End bp9569878 
Gene Length2451 bp 
Protein Length816 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003344064 
Protein GI271969868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC AGGCCAAAGA GATATTCGAG GCGCAGAGCA AGAGCCTCCG TGAGTTGCTG 
TCGGACAATG GTCTCGGCCT GTACCTTCCG CCGTATCAGC GACCGTATGG CTGGGGTAAG
GACAAAGTCG AGAAGCTGCT CGACGATACC CTTCACGGTC TGAAGAATCT CGGCGAGGCT
TCCGACAGCT TCACCTTCCT AGGCACCGTA ATCACCATCC ATGACGTCAA CCACGTTACG
GTGCAGCCGA TTCTGAAGCC CGAAGTGCCT TCCAAGGTGC TCACCGTGAT CGACGGGCAG
CAACGTCTGT CGAGCCTGCT CCTTCTGCTC GTGAGCCTTC ACAATCTGAT CCGCCAGCAC
TCGTGGAAGG TCTTCAAGGG CAAGACACCG GATTCCACGG ACCCTGCCGG TGTCGCGCTC
TACTCAGAAA CCGTTAGCAT CCTGCAGACC CTCAGTACTG CTTTCTATGA ACGAAAGAAC
TTCGGCGATG CGCCGATCTA CCCCCGCTTG ATCCGTGCCT TCGCTGACCA GTGGTCCAAG
GATGCAAAGC TCAAACTATA TGAGTCTCCA ATTGCGAACC TAATCTACAT CTACTCGGTG
AAGGCAGACG CGGAGCCCCC GACCGTGAAG CCGACCGACT TCAGGCCGAA GGCGCGTTCC
GGTGCAGGTG AAAGCGAGAG CGATCTAATC AAGCGGTTCA GCGAGATCCG TGCCGCGCTA
ACCAAGCTCG CTCAGCGCAA ACCGATTGAG GAGCTTGAGG GTTTGCCACC GCTCTCGATC
TTGGCCACTC AGATCGAGTT TCAGCGTGCG CTGTTCAACC ATGAGCTCGA CCCCAAGCTG
TGCACGTGGC TATGCGAGCT GGAGGACGAG CCCGAGGCCG TCTTGATGCG GCTCGTGTTG
TTCGCCGCCT ATGCCCTGAA CCGCATTGCG CTGACTGTAG TGCAGGGCAA GGACGAGGAC
TATGCCTTTA CCATCTTCGA GTCACTGAAC ACAACCGGTG AGCCCTTAAC TGCCTTCGAG
ACGTTCTTGC CGCGCGTTGT GATGGCGGAA AGAGTTCAGG ACTACCGGGG CTCTAGCGCG
CACGAGCGCA TGAAGGCTGT TCAGAGCTAC CTCGACCGAT TTGACGTGGG AGAGAAGCTG
CAGAATGCGA CCCGCGAGCT GCTAGTGACG TTCGCCCTCG CGGAGACGGC CAAGAAGCTC
TCGAAGCGGC TACCTGACCA ACGCGTCTAC ATGAAGGACA CCTTCGACCG TCATAGGGAA
TCCGACGACG ATCGCGCTGC GTACTTGCGT CACCTGAGCG ACACAGCGAC TTTCGTTGGC
ACGACGTGGG AGCCAGCGAA GGACGCTACC CGTCAGCTCG TCGGACTCCC CACCTCCGCC
ATGACGGACA CGGTCAAGCT CTGCCTAGCG TTCCTAAAAG ACCTCAACCA CACGATCGCC
ATTGCACCCC TGCTGCGCTT CTACTCCGAA GCTGTTCATG CAGAAGAGGG TGAGGAGCGG
GACAGACGAG TCGCGGAGTT TGAAACGGCA ATCAAGGCAA TCACCGCCTT CACAGTCCTC
TGGCGAGCAA CCCGACGTGG CACCGGGAAC ATCGACAGCC AGTATCGGGC CATCATGGCG
GGTGACTCCT CGCTGACTGG CATGGGCCCC CTCGCGCGTC AGCGGGCGGT GCCAGACCAA
GACGAGCCTG AGCCGATGGT GGACGCCGAA GCCCTGAAGA AGGAGCTCGC GGCGCGCTTG
TCCAGCACCG ACAAGAAGTA CGGCGGCATC CCGAACCTTG CGTCGTTTCT GGCGGCGGCA
ACAGCGTTGC CTCTCTACAC GATCAGCCGG CCGCTGACGC GCTTCCTTCT GCTGGCGGCT
TACCACGACA CCATTGAAGA CCCCGACCAT CCCGGCCTGA TAAAGCAGGG AAAGGTGGGT
GTGGCTCCGT GCTTCACGTC AGACGGCTGG TTCGATGAAA CGCATTTCAC AATCGAGCAC
ATCGCTCCGC AGCAAGAGAC TGGTGGATGG CACAAGGGCT TCTACAGCGA AAAGGAGATC
GTTCACAAGA TCGGCAATTT GGTCCTTGCG CCGGGGGCTG CTAACGCGTC ACTAAGTTCG
CGGCCGTGGA CTGAGAAGAA GGTGCTGTAT GCCGCACTTG GTGCTACGAC TACCGGGGAG
GCCGAGATCA TCCTCAATGA GTCGGGCTTG ACGTTCGCGC AGTCGACCCA GGAACTGGCC
CAGATGTCTC ATTACCTGCC GCATCTGCGA GCGCTCGGGC AGCGCGATGC GGAGTGGGAC
CCGGCTTTCA TGGATCAGCG AGCCGCTGTT CTCCTTCGAC TCGCCTACGC GCGGCTGAAG
GACTGGCTCG GCATCGCGTG GTCAGAATCG ACGACTGATC CAGTGGTCCG CCATGTCGAT
GATGAGGTTG AACTCGACGA AGATGAGGAC TCCGCGGAAA ACACCGTCTG A
 
Protein sequence
MPTQAKEIFE AQSKSLRELL SDNGLGLYLP PYQRPYGWGK DKVEKLLDDT LHGLKNLGEA 
SDSFTFLGTV ITIHDVNHVT VQPILKPEVP SKVLTVIDGQ QRLSSLLLLL VSLHNLIRQH
SWKVFKGKTP DSTDPAGVAL YSETVSILQT LSTAFYERKN FGDAPIYPRL IRAFADQWSK
DAKLKLYESP IANLIYIYSV KADAEPPTVK PTDFRPKARS GAGESESDLI KRFSEIRAAL
TKLAQRKPIE ELEGLPPLSI LATQIEFQRA LFNHELDPKL CTWLCELEDE PEAVLMRLVL
FAAYALNRIA LTVVQGKDED YAFTIFESLN TTGEPLTAFE TFLPRVVMAE RVQDYRGSSA
HERMKAVQSY LDRFDVGEKL QNATRELLVT FALAETAKKL SKRLPDQRVY MKDTFDRHRE
SDDDRAAYLR HLSDTATFVG TTWEPAKDAT RQLVGLPTSA MTDTVKLCLA FLKDLNHTIA
IAPLLRFYSE AVHAEEGEER DRRVAEFETA IKAITAFTVL WRATRRGTGN IDSQYRAIMA
GDSSLTGMGP LARQRAVPDQ DEPEPMVDAE ALKKELAARL SSTDKKYGGI PNLASFLAAA
TALPLYTISR PLTRFLLLAA YHDTIEDPDH PGLIKQGKVG VAPCFTSDGW FDETHFTIEH
IAPQQETGGW HKGFYSEKEI VHKIGNLVLA PGAANASLSS RPWTEKKVLY AALGATTTGE
AEIILNESGL TFAQSTQELA QMSHYLPHLR ALGQRDAEWD PAFMDQRAAV LLRLAYARLK
DWLGIAWSES TTDPVVRHVD DEVELDEDED SAENTV