Gene Sros_8542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8542 
Symbol 
ID8671876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9425398 
End bp9427572 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content70% 
IMG OID 
Productmembrane carboxypeptidase 
Protein accessionYP_003343927 
Protein GI271969731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAAGG GCGGAGAGAA GGGCAAACCC AGAAGAAGAC TTCTGCGGAT CACGCTCGTC 
GTCTTCGGCG TCGCCGTGGT CGCGGGGATC GGTCTCCTGG GGGTGGCGTG GCTCATGACG
CCGATCCCGG ACAGCACCCA GCCCAGGGCC ACCGCGCAGG GTTCGGTTAT CTACTACCGG
GACGGCAAGA CCGTGCTGGC CAAGCAGGGG GTCAACCGCA GGAGCGTGGC CCTGGCGCAG
ATCCCGGAGA GTGTCAGGGA CGCGGTCATC GCGGCCGAGA ACCGCTCCTT CTACGAGGAC
AAGGGCGTCT CCCTCAAGGG CACCTTCCGC GCCATGTGGT CCACGGTCAC CGGCCAGCAG
CTCCAGGGCG GCTCCACGAT CACCCAGCAG ATGGTCCGCA ACTACTACAG CGGCCTCAGC
CAGGAACGCT CCGTCGTCCG CAAGCTCAAG GAGGTCATGA TCTCCTTGAA GGTGGACCAG
TCGAAGTCCA AGGACTGGGT GCTGGAGCAG TACCTCAACA CGATCTACTT CGGCCGGGGC
GCGGACGGGA TCCAGGCGGC GGCCGACGCC TACTTCCGCA AGGACGTCGG CAAGCTGACC
GTCGCCGAGG GCGCCTACCT CGCCGCGGTG ATCCAGCAGC CGTCCCGGTT CGCCGACCCC
CAAGGCGCCG ACCTGGAGGC GGCCACGGCC CGCTGGAAGT CCGTGATCGA CGGCATGGTG
CAGACCGGGG CCCTGACCTC CGAGCAGGCC GCCGCGACCA CCTTCCCCAC CCTCAAGAAG
CCCAGGGCGA TCTTCGCGCC CAAGGGGCAG GAGGGCTACA TGCTCGACCA GGTGGCGGCC
GAGCTCAAGC GCATGGGCTA CACCGACGAG GCCATCAACC AGGGCGGCCT GAAGGTCGTG
TCCACCTTCG ACAAGGGGCT GATGGCCGCC GCGCAGCGGG CCGTCACCTC GGTCCTGCCC
GAGGGTACGT CGAAGAAGGT CCGCACCGGC CTGGCCGCCG TGGACCCCGG CAGCGGGGAG
GTCGTGGCCT TCTACGGCGG GCCCAGCTAC GAGGCCAACA AGTTCGACAA CGCCTTCTCG
GCCAAGGTGC AGGCCGGATC CACCTTCAAG GCCTACACGC TCGCGGCCGC CCTGAACAAC
GGCTTCGGCC TCGACACCCG CGTGGACGGC AACTCGCCCC TGCACGTCAC CTCGGGCGAC
AAGGGCATCC CCAACTCGGG CAACTACTCC TACGGCCAGG TCAACCTGGT CAAGGCGACC
CAGAGCTCGG TCAACACCGC CTTCGTGGAC CTGGGGCAGC GGGTCGGGCT GGAGAAGGTC
GTCAAGATCG CCAAGGCCGC GGGCATCCCC GCCGACCAGC TCGCCCGCCA GGCGAGCTTT
CCCACGCTGC CGCTGGGGAC GGCGTCGGTG AGCGCCGTGC AGAACGCCTC CGGCTTCGCC
ACGTTCGCCG CCGGCGGCGT CCACCGCGAC GCCCACGTGA TCCGCTCGGT CACCGACGCC
AAGGGCAAGA CCACCAAGAT CAAGGTCAAG GGCGAACGGG CCTTCACCGA GCAGACCGCC
ATCGACGCCA CCTACGCGAT GACCCAGGTC GTCGAGGCGG GCACCGGTTC GGCCGCCCGC
CTCTACGACC GGCCGGTGGC CGGCAAGACC GGCACCACCG ACAAGTCGGC GGCCGTGTGG
TTCGCCGGGT TCACCCCGCA GATGGCGGTC GCGGTGGACA TGTTCCGCGA CGACAACAAG
CCGGTGGTCG TCAACGGCAG CGCCCAGTAC GGCGGGACCT ACCCGGCGCA GATCTGGCGT
GCGTTCATGA CCGAGGCGAT GTCCGGCAAG CCGGTCAAGG AGTTCGCCGA GCCGTCCAAC
TACGGCTACT CCACCTACTA CGACGACGGC TACGGCTCCG ACGACGACTA CGGCGACTAC
GACGATCGTC AGGACGTCTC GCCCACCCCG CTCCCCGACG GGACGACCGG CGAGGTCCCC
GACCAGACCC CGTCCCCGGA CGGCACGGGC GACGGGACCG GTGACGGCAC GGGCGACGAC
CCGGGTGACG GGACCGGCAC CGGCGACGGC ACGGGCGACG GGACGGGCGA CGGGACGGGC
GACGACACGG GCACCGGTCC CCGCGACCAG ACCCGGCCTC CGGGAGAGTT CTCCCAGAGG
CCGCCGGACC GCTAG
 
Protein sequence
MLKGGEKGKP RRRLLRITLV VFGVAVVAGI GLLGVAWLMT PIPDSTQPRA TAQGSVIYYR 
DGKTVLAKQG VNRRSVALAQ IPESVRDAVI AAENRSFYED KGVSLKGTFR AMWSTVTGQQ
LQGGSTITQQ MVRNYYSGLS QERSVVRKLK EVMISLKVDQ SKSKDWVLEQ YLNTIYFGRG
ADGIQAAADA YFRKDVGKLT VAEGAYLAAV IQQPSRFADP QGADLEAATA RWKSVIDGMV
QTGALTSEQA AATTFPTLKK PRAIFAPKGQ EGYMLDQVAA ELKRMGYTDE AINQGGLKVV
STFDKGLMAA AQRAVTSVLP EGTSKKVRTG LAAVDPGSGE VVAFYGGPSY EANKFDNAFS
AKVQAGSTFK AYTLAAALNN GFGLDTRVDG NSPLHVTSGD KGIPNSGNYS YGQVNLVKAT
QSSVNTAFVD LGQRVGLEKV VKIAKAAGIP ADQLARQASF PTLPLGTASV SAVQNASGFA
TFAAGGVHRD AHVIRSVTDA KGKTTKIKVK GERAFTEQTA IDATYAMTQV VEAGTGSAAR
LYDRPVAGKT GTTDKSAAVW FAGFTPQMAV AVDMFRDDNK PVVVNGSAQY GGTYPAQIWR
AFMTEAMSGK PVKEFAEPSN YGYSTYYDDG YGSDDDYGDY DDRQDVSPTP LPDGTTGEVP
DQTPSPDGTG DGTGDGTGDD PGDGTGTGDG TGDGTGDGTG DDTGTGPRDQ TRPPGEFSQR
PPDR