Gene Sros_8469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8469 
Symbol 
ID8671803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9345646 
End bp9346734 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID 
ProductCell wall-associated hydrolase (invasion- associated protein)-like protein 
Protein accessionYP_003343856 
Protein GI271969660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA ACAGGAAGCT GCACCTCGCC CTGATCCTCG GCGTCGCGGG GCTCTGCCTG 
CTCGCACTGG TCATGGCGCC GATGCTGATG GTGAGCACGT TCCCGTCCTT CACCGGCGGC
GGGATGCCCG ACTGCGAGGA CATGGCCAGG ACCGTGAGCG CGCAGTCCGA GACCGCGGCG
TCGGACATAC CGGCGGAATA CCTGAAGCTG TACCACGAGC ACGGCGAGAA GATCGGCGTG
CAGTGGAACG TGCTCGCCGG GGTGGGCAAG CGGGAGACCG ACCACGGGCG CTCCACGCTC
CCCGGGGTGC GCAGCGGCAC CAACTACGCC GGGGCCGCGG GGCCGATGCA GTTCCTGATC
AGCACCTGGG GCGGCAAGGC GAAGATCAAG ATCCCGTCGC GGTTCAACGG CTACGCCTCC
GACGGCGACG ACGACGGCTG GGCCGACGTC TACAACCCGG CGGACGCGAT CCTGGGCGCG
GCGAAGATGC TCAAGCGCAA CGGCGCGCCG GAGGACGTAC GGCGGTCGCT GTTCGTCTAC
AACCGGGCCT GGTGGTACGT GGACCAGGTC ATGGAGATCG CCGGGAAGTA CGCCGAGGAC
GGCGCGGTCA GCGTCCCTCC GGAGGCGGAG GCGGCCTGCG ACGAGCCCCT GGTGGAGGCG
GCGCCGAGCG GCACGGTGGC CGGGATCCTG GAGTACGCGC TGGCCCAGCG CGGCAAGCCG
TACCTGTGGG GCGGCACCGG GCCGGACGCC TTCGACTGTT CCGGGATCAT CTACATGGCC
TACCGGAGCG TGGGCCTGAG CATCCCGCGC ACGACCTTCG GCCAGTGGCC CTTCGGCGTG
AAGATCGCGC CGGGTGACGA GCAGGCAGGG GATCTGGTCT TCTTCAACTC GGGGCCGGGC
ACCGGGGCCG ACAATCCCGG GCACGTGGGC ATGGTGGTCT CACCGGGCAA GATGGTCGAG
GCGAGGTGCC GCCTGTGCGG GCCGATCAAG GTCACCACCT ACCGCGACCG GACCGGCATC
GTGGGGTTCA CCCGGCCGTT GCGAAACCCC GATGTCCTCG CGCAGCTCAA ATTAAGGGAG
CAGGGCTGA
 
Protein sequence
MTGNRKLHLA LILGVAGLCL LALVMAPMLM VSTFPSFTGG GMPDCEDMAR TVSAQSETAA 
SDIPAEYLKL YHEHGEKIGV QWNVLAGVGK RETDHGRSTL PGVRSGTNYA GAAGPMQFLI
STWGGKAKIK IPSRFNGYAS DGDDDGWADV YNPADAILGA AKMLKRNGAP EDVRRSLFVY
NRAWWYVDQV MEIAGKYAED GAVSVPPEAE AACDEPLVEA APSGTVAGIL EYALAQRGKP
YLWGGTGPDA FDCSGIIYMA YRSVGLSIPR TTFGQWPFGV KIAPGDEQAG DLVFFNSGPG
TGADNPGHVG MVVSPGKMVE ARCRLCGPIK VTTYRDRTGI VGFTRPLRNP DVLAQLKLRE
QG