Gene Sros_8129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8129 
Symbol 
ID8671457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8960536 
End bp8962044 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content74% 
IMG OID 
Productiron ABC transporter, permease protein 
Protein accessionYP_003343527 
Protein GI271969331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.161316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTCC GCCGGATCCC CGCGGGACTG CTGACGCCCG CCGCCGTGAC GGCGGCGCTG 
GCGCTGCTGC CGGTGGGCTA CCTGGTGGTG CGCTCGGCCG AGGGCGGCCT CGACGGCGTG
GCCAGGACGC TGCTGCGGGC CAGGACGCTG GAGCTGGCCC TGCGCAGCCT GGGACTGGCG
GCCGTGGTGA CCGCGCTGTG CGTGGCCATC GGGATCTCGC TGGCCTGGCT GGTGATCAGG
AGCGACCTGC CGGGACGCGG CTTCTTCGGC ATCCTGGCCG CGCTGCCGCT CGCCGTGCCG
TCCTACGTCG CCGCCTACAC GTGGGTGGCC GCGGTCGACC TGGAGGGTTT CACCGGGTCG
GTGCTGGTGC TCACGCTCTG CAGCTACCCC TACGTCTACC TTCCGGTGGC CGCCGCGCTC
AGCAGGATGG ATCCGGCGAC GGAGGAGGTC GCGCTCTCCC TGGGGCGCGG CCGGTCCGGC
GTCGTCCTCC GCCAGCTACG GCCCTCGGCC GCGGCGGGGG CGCTACTGGT CGCGATGTAC
GTGCTCGCCG AGTTCGGTGC GGTGGCGATC ATGCGCTTCG ACGTGTTCAC CACGCAGATC
TACACCTCCT ACCGGGCGGG CTTCAACCGC ACCCCGGCGG CGGTGCTCGG GCTGCTGCTG
GTGCTGATCA CACTCCTGAT CGTGGTGGCG GAGTCCCGCA GCCGGGGCAG GGCCTCCTAC
GCCATGCGGG GCAACCCGGC GCGCAGGCCC CCGGTCATCC GGCTGCGCGC AGGGACCAGG
GCGTTCGCGC TGGCCTGGGC CACCGCGCTC GCCGGCCTCG CGGTCGGCTT CCCCCTGGCC
GGCATCGGCT ACTGGCTGCT CAACGGCTCC TCGGCCAGGG TCGACCTGGG AGAGCTGTCC
GGGGCGGTGG GCGCCACGCT GGGCGTCGCG GCGGCGGGCG CGCTGCTCAC CACGGCGCTG
GCCGTACCGG TCGGGATCAT CGCGGCGCGT TACCGCGGCC GTACGGCGAC CTTCCTGGAG
CAGTCCACCT ACGTGGGGCA TTCGCTGCCC GGCATCGTCA TGGCGCTGTC GTTGGTGTTC
TTCGCCGTGC GCTACGTCCC GGCCGTCTAC CAGCGCTCCC CGCTGCTGGT GGTCGCCTAC
GCCGTGCTGT TCATGCCCGC CGCGGTCGGC GCGGTGCGGG CCTCGGTCCT CCAGTCGCCG
CCGGTGCTGG AGGAGGTCGC CCGGTCGCTG GGCCGCACCC CGCTGCAGGC CGTCCGCGCC
GTCACCCTCC CGCTCGCCCT GCCCGGCGTG CTCGCGGGGG CCGCTCTGGT GTTCCTCACC
GCGATGAAGG AACTGCCCGC CACCCTGCTG CTCCGGCCGA CCGGCATGGA GACCCTCGCG
ACCCAGCTGT GGGCGGAGAC CGGTTCGGGC GCCTACGCCG CCGCCGCGCC GTACGCCGCC
CTGCTCATGC TTCTGGCGGC CGTCCCCGGT TTCCTCCTGG GCCGCCGATC CCTCAAGGAG
ACGTCTTGA
 
Protein sequence
MSVRRIPAGL LTPAAVTAAL ALLPVGYLVV RSAEGGLDGV ARTLLRARTL ELALRSLGLA 
AVVTALCVAI GISLAWLVIR SDLPGRGFFG ILAALPLAVP SYVAAYTWVA AVDLEGFTGS
VLVLTLCSYP YVYLPVAAAL SRMDPATEEV ALSLGRGRSG VVLRQLRPSA AAGALLVAMY
VLAEFGAVAI MRFDVFTTQI YTSYRAGFNR TPAAVLGLLL VLITLLIVVA ESRSRGRASY
AMRGNPARRP PVIRLRAGTR AFALAWATAL AGLAVGFPLA GIGYWLLNGS SARVDLGELS
GAVGATLGVA AAGALLTTAL AVPVGIIAAR YRGRTATFLE QSTYVGHSLP GIVMALSLVF
FAVRYVPAVY QRSPLLVVAY AVLFMPAAVG AVRASVLQSP PVLEEVARSL GRTPLQAVRA
VTLPLALPGV LAGAALVFLT AMKELPATLL LRPTGMETLA TQLWAETGSG AYAAAAPYAA
LLMLLAAVPG FLLGRRSLKE TS