Gene Sros_7845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7845 
Symbol 
ID8671168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8652932 
End bp8654515 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content68% 
IMG OID 
ProductAmino acid transporter-like protein 
Protein accessionYP_003343251 
Protein GI271969055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.162631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGT ATTCACCACC CACCCCCGGC AGTGAGACCA CCTCAGGCGT CGAGGAGTTC 
GGCTACAAGC AGGCGATGAA GCGCGGCACC GGCCGCTTCG CCTCGTTCGC CGTCGCGTTC
GCCTTCGTCT CGATCGCCAC CGGCATCTTC ACCACCTACG GTTCGGTGCT GAACAGCTCC
GGACCGGTCG GCATCTGGAC CTGGCCGATC GTGATTGTCG GGCAGCTGGC CGTCGCGTTC
ATCTTCGGGT CCCTGGCCGC GCGCATCCCG GTGACCGGAT ACTCCTACCA GTGGATGTCC
CGGCTGGCGA ACCCCGTGCT CGGGTGGATC ATCGGCTGGA TCTCGTTCAC GTTCCTGGCG
ATCGTGGTCG TCGCGGTGGA CTACACCATC GCCTCCACCG TTCTGCCCGT TCTGCTGCAG
TACGAGGGGA CGGCGCTGAA CGCGTGGGTG ATCACAGGCG TGGTCATCCT GTTCCAGGCC
GTCCTGGTGG CGTTCTCCAC CAAGTGGACC GAGCGGGTCA ACAACTTCGC CGTGTCCGCG
GAGCTCATCG GCATGGTCGC CCTCGTCCTG CTCCTCCTCG GCGTGGGGTT CGTCGCGAAG
GAGGTCAACT TCGCGAACCT GTTCAGCACC GGCGCCGTCC CGGCCGACGG CTACCTCAGC
TTCGGGACGC TCACCTCGGC GGGCCCGTGG ATGCTGGGCT TCCTGCTCGG CGCGTTCACG
ATCGTCGGCT TCGAGTCGGC GGCCAACCTC GCGGAGGAGA CGAAGGACCC GGCCCGCGTC
GTCCCCCGCG CCATGTGGCA GGCGGTTCTC GCCTCCGGCG TGCTCGGGTT CCTGTTCCTC
GTCGCCGTCA CCCTGCTCGC CGGCGACCCG GTCGAGCTGG CGAAGTCGGC GACGCCGATC
GCCGATGTGA TCACCCGGGT GCTGGGCCCC GTCGTGGGTA CGGCGCTGCT GGTGCTGGTG
GTGATCGCGA TCTTCGCCTG CGGCATGGTG ATCCTCATGA CCGGGGTGCG CCTGGTGTGG
GCGATGTCCC GCGACGAGCG GTTCCCCGGC TGGCAGGCCT GGCGGAAGAT CTCGCCGCGG
TTCGGCACGC CTCTGAACGC CACCGTGTTC ATGCTCGTCA TCGGCGAGCT GATCCTGGCG
ATCTTCTCCA CCCGGACCGA CGCCCTGTTC GGACTGTTCG CCGCCGCCAC CCTGCTGCCC
GCGATCATCT ACACGGGGAC CGTCGTCATG TACGTGGTCA AGCGGAAGGC GCTGCCGCCG
AGCAGGGGAT TCGACCTGGG CCGGTGGGAG ATCCCGGTGA TCGTCGTCGC GCTGGTCTGG
CTGGTGTTCG AGCTGCTGCT CTTCCGTGAC GCCTCGTTCG TGGACCCGTG GACCTACGTG
CTGATCATGC TTGTCCTGGG CGCCGCGTAC CTGGTGTACC TCCTGGTCAC CCGCGGCGGG
GCCAGGGGGC TGGCGATGCC GGACATGCAC TCCATCGACG CGGAGCTGAA CGCCGACGCC
GCCAAGGGCA CGGAAGCCGC CAGGGACGGC GCCACCGCAG GCGCGGGGGC CGTCGACGAC
ACGGACGGGG CGCGCGGGCG GTGA
 
Protein sequence
MSQYSPPTPG SETTSGVEEF GYKQAMKRGT GRFASFAVAF AFVSIATGIF TTYGSVLNSS 
GPVGIWTWPI VIVGQLAVAF IFGSLAARIP VTGYSYQWMS RLANPVLGWI IGWISFTFLA
IVVVAVDYTI ASTVLPVLLQ YEGTALNAWV ITGVVILFQA VLVAFSTKWT ERVNNFAVSA
ELIGMVALVL LLLGVGFVAK EVNFANLFST GAVPADGYLS FGTLTSAGPW MLGFLLGAFT
IVGFESAANL AEETKDPARV VPRAMWQAVL ASGVLGFLFL VAVTLLAGDP VELAKSATPI
ADVITRVLGP VVGTALLVLV VIAIFACGMV ILMTGVRLVW AMSRDERFPG WQAWRKISPR
FGTPLNATVF MLVIGELILA IFSTRTDALF GLFAAATLLP AIIYTGTVVM YVVKRKALPP
SRGFDLGRWE IPVIVVALVW LVFELLLFRD ASFVDPWTYV LIMLVLGAAY LVYLLVTRGG
ARGLAMPDMH SIDAELNADA AKGTEAARDG ATAGAGAVDD TDGARGR