| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7707 |
|---|
| Symbol | |
|---|
| ID | 8671029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8507630 |
|---|
| End bp | 8509087 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC-type sugar transport system periplasmic component-like protein |
|---|
| Protein accession | YP_003343121 |
|---|
| Protein GI | 271968925 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.570568 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATT CGGTCGGTAC GCCCGGAGAT ATCACCCGGC GGCAGATGCT CCGCCGGATC
GGCCTGACCG CTCTGGTGGC CGGTCCCGGC GCCGGGCTCC TCAGCGCCTG TGCCACCGGT
GGCGGCTCCA GCCCCGCGGC GACCACCTCC GCGGCCCCGT CCGCGGGTGG CGCGGTCTCC
GCGGCCAACC CGTTCGGCGT CGCCGCCGAC GCTCCGCTCG AAGTCGTCAT CTTCAAGGGC
GGTCTCGGCG ACAGCTACGC GACCGAGGTC CACGAGCCGC TGTACAAGAA GGCCTTCCCC
AAGGCCACGG TCAAGCACGT CGCCACGCAG CAGATCGCGC AGACCCTGCA GCCCCGCTTC
GCCGGCGGCG ACGTCCCGGA CATGATCGCC AACTCGGGCA CCGACCTGAT GGACAACGGC
GCGCTGCAGC AGGAGGGCCA GCTGCTGGAG CTCACCGAGC TGTGGGACGC CCCCTCCATC
GACGACCCCG CCAAGAAGGT GCGCGACACG GTCGCGCCGG GCACCGTCGA GTCGGGTCTC
ATCGACAACA AGCCGTACCT GATGAACTAC GTCTTCTCGG CCTACGGCCT CTGGTACGAC
TCGGTCCTGT TCGAGAAGAA CGGCTGGACC CCGCCGAAGA CCTTCGAGGA GTTCAAGGCC
TTCTGTGAGA AGGCCAAGGC CGCCGGGATC ACCCCCTTCG CGTACGCGGG CAAGAACGCC
TCCTACTACG CCTACTGGAT GATCCTCATC TCCGCCGCGA AGATCGAGGG CAACCAGCTC
CTGATCGACA TCGACAACCT CGTCGACGGC GTCTGGAAGC GCGACTCGGT CAAGCAGTCC
GCCGCCGCCT GGGCCGAGAT CGGCAAGTAC ATGGACAAGT CCTTCGAGGG CCTGATCCAC
ACCGACGTGC AGACCCGGCA GAACCAGGGC AAGATCGCCC TCTACCCGAC CGGCTCCTGG
CTGGAGAACG AGCAGAAGAG CCAGACGCCC AAGGAGTTCA AGTACGCCCT GACGCCCACC
CCGAGCGTCA CCGCGGCCGA CAAGCTGCCG TTCGAGGCCA TCCGCGCCGC CGCCGGCGAG
GCCTACATCG TCCCCGCCAA GTCCAAGAAC CCCAAGGGCG GCCTGGAGTA CCTGCGCATC
ATGCTCTCCA AGGAGGGCGC CCGCGGCTTC ACCGAGAAGT CCGGCAACAT CACCGTCGTC
ACCGGTGCCG CCGACGGCCT GGACCTGTCG CCCGGCAACG CGAGCCTCAG CGCCGCGCAG
ACCGCGGCCG GCTCGAACAT CGTCACCCGC AGCGACTTCG AGAACTGGTA CAAGGAGCTT
GAGACCGACC TGCGCAAGCA CACCAACGCG CTGATGTTCG GCCGCATCTC CGCCGACGAG
TTCTGCGAGA AGATGCAGAA GGCCGCCGAC AAGACCAAGG CCGACTCGTC CATCACCAAG
CAGAACCGGA CGGTGTAG
|
|---|
| Protein sequence | MSNSVGTPGD ITRRQMLRRI GLTALVAGPG AGLLSACATG GGSSPAATTS AAPSAGGAVS
AANPFGVAAD APLEVVIFKG GLGDSYATEV HEPLYKKAFP KATVKHVATQ QIAQTLQPRF
AGGDVPDMIA NSGTDLMDNG ALQQEGQLLE LTELWDAPSI DDPAKKVRDT VAPGTVESGL
IDNKPYLMNY VFSAYGLWYD SVLFEKNGWT PPKTFEEFKA FCEKAKAAGI TPFAYAGKNA
SYYAYWMILI SAAKIEGNQL LIDIDNLVDG VWKRDSVKQS AAAWAEIGKY MDKSFEGLIH
TDVQTRQNQG KIALYPTGSW LENEQKSQTP KEFKYALTPT PSVTAADKLP FEAIRAAAGE
AYIVPAKSKN PKGGLEYLRI MLSKEGARGF TEKSGNITVV TGAADGLDLS PGNASLSAAQ
TAAGSNIVTR SDFENWYKEL ETDLRKHTNA LMFGRISADE FCEKMQKAAD KTKADSSITK
QNRTV
|
|---|
| |