Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7428 |
Symbol | |
ID | 8670749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 8195270 |
End bp | 8196490 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | antibiotic efflux protein |
Protein accession | YP_003342854 |
Protein GI | 271968658 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0620213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCAGG ACATGACACA GGCCGACGCC GAGCCACGCT TGTCCGCGGC CTACTGGCGG TTGTGGTGGG CGACGGGCAT CAACAGCATC GGTGACGGGG CATTCGCCGC GGCTGTCCCG CTGCTGGCCG TCACGATCAC GCACGACCCG CGGCTCGTGT CGGTCGTATC CGCGGCGACG TATCTGCCCT GGCTGCTGCT GTCGCTCCCC GTCGGTGCGC TCGTCGACCG GCACGACCGC GCCGGCCTCA TGTGGCGCTC GCAGGCGATC CAGGCGGTGA TCGTCAGCGG CATCGCCATC CTTGCCGCGT TCGGCCACAT CGGCATCCCG GTGCTCGCGG TCATGGCCTT CGGGCTGGGG GTGTGCGAGA TCGTTTTCGC CGGCGCGGCG CATGCGATCT TGCCGGACAT CGTCGCCAGG CCCCTGCTGC ACAAGGCGAA CGGCCATCAG CAGACGATCG CAACGATCGG CTACCAGTTC CTGGGACCAC CGCTCGGCAG CCTGCTGTTC GCGGTCGCCG TGGCGTCGCC GTTCGGGATG GACGCCGCCT CCTTCGCCCT GTCCGCCGCA CTGCTGGCGA CATTGCCCAG GCACAGGCAC CGGCGGATCG AGCACCCACC GATGCGTACG GCGATCGCGG AGGGCCTGCG CCGGCTGGCC CGTCACCGGC TGCTGCGCAC CCTCGCGGTC CTGCTCGGGG TCAACACCTT CTGCGGCCAA CTGGGCAACG TCACACTCGT CCTGCTGGCG ACCCGGACGC TGCACCTCGA CACGCGCGGT TACGGCCTGC TGCTCGCCGG CGCCGCGGTC GGCAGCCTGC TCGGCGGCCT GGTCAGTGCG CGCGTCGTCA ACAGGGTCGG CGCGCTTCCC GCGCTCCTCA CCGCGCTCGC CACGAACGTC GTCGTCTTCG TCGGGATCGG GCTGAGCCCG AACGCGATCG TGCTCGGCGC CCTGCTGGCC GTCAACGGCT TCGTCATCAC GCTGTGGACC ATCGTGACCG TCAGCCTCCG GCAGCAGGCC GTACCGTCCG AGATGCTCGG CCGGGTCAAC AGCGTCTACA AGATGATCGG CTGGGGACTG ATCCCGCTCG GGGGACTGGC CGGCGGACTG GTGGCGCACA CGTTCGGGTT GCGCGCGCCG TACCCCGTCG CGGGTGTGCT GCGAGGGGTC GCCTTGCTGA TCGCGATGCC CGTACTGATC CGCGCCATGC GTGACCAGTG A
|
Protein sequence | MKQDMTQADA EPRLSAAYWR LWWATGINSI GDGAFAAAVP LLAVTITHDP RLVSVVSAAT YLPWLLLSLP VGALVDRHDR AGLMWRSQAI QAVIVSGIAI LAAFGHIGIP VLAVMAFGLG VCEIVFAGAA HAILPDIVAR PLLHKANGHQ QTIATIGYQF LGPPLGSLLF AVAVASPFGM DAASFALSAA LLATLPRHRH RRIEHPPMRT AIAEGLRRLA RHRLLRTLAV LLGVNTFCGQ LGNVTLVLLA TRTLHLDTRG YGLLLAGAAV GSLLGGLVSA RVVNRVGALP ALLTALATNV VVFVGIGLSP NAIVLGALLA VNGFVITLWT IVTVSLRQQA VPSEMLGRVN SVYKMIGWGL IPLGGLAGGL VAHTFGLRAP YPVAGVLRGV ALLIAMPVLI RAMRDQ
|
| |